KEGG   Bacillus sp. SDLI1: AUL54_19240
Entry
AUL54_19240       CDS       T05207                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
bacs  Bacillus sp. SDLI1
Pathway
bacs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bacs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AUL54_19240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bacs03019]
    AUL54_19240
   03400 DNA repair and recombination proteins [BR:bacs03400]
    AUL54_19240
Enzymes [BR:bacs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AUL54_19240
Messenger RNA biogenesis [BR:bacs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AUL54_19240
DNA repair and recombination proteins [BR:bacs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AUL54_19240
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII
Other DBs
NCBI-ProteinID: AME08313
UniProt: A0A0X8KJL9
Position
3942667..3944157
AA seq 496 aa
MTELHKALYRYFGLHSFKKGQEEIMTSVLQKKDTIAMLPTGGGKSLCYQLPGYIMDGLVL
IISPLLSLMEDQVQQLKAKGEKRVAALNSMLNAAERHFILSNISRYKFLYMSPEALSSPY
VLNRLKNVPVSLFVIDEAHCISEWGHDFRPDYSKLGPFRQALGKPPVLALTATATKETLS
DVTEVLGLEHAVRHLYSVNRPNILLTVEHLADNAEKISRIIELAEKLEGPGIVYCPTRKW
AEELAAELNEKTGKRTDYYHGGMDTGDRILIQQQFIHNQLDCICCTNAFGMGVDKSDIRF
VIHFYPPQTAEAFMQEIGRAGRDGSPSVSILLRAPGDTELQQQIIQTESLSDYDLEGILA
IIRDAGTSDERKLRDVLISKGVQETQARTAIHLYLQGKTTKEQLQEELTYRVEKKLHKMN
RFSALLERKECIRKALLAYFDESYEPEDQTGQCCSSCGVDLAPYEQKGERKNMERFEDWK
MELGRIFGLESAGELS
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgactgagctccataaagctttataccggtattttggtttgcattcgtttaaaaaaggg
caggaagagattatgactagcgtgctccaaaaaaaggatacgatcgccatgcttccgacc
ggcgggggaaaatcattatgctatcagcttcccggttacataatggacggactcgtgctg
attatttcgccgctcctttcattaatggaagatcaggtgcagcagctgaaagcgaaagga
gaaaaacgggttgcggcattaaacagcatgctgaatgctgccgagcggcattttattctc
agcaacatcagcaggtacaaatttctttatatgtcccctgaagccctctcgtcaccttat
gtgctgaaccgtttgaaaaacgtcccggtcagtttgtttgtcattgatgaggctcattgc
atatcagaatgggggcatgatttcaggcctgattattcaaagctcgggcccttcaggcaa
gcactcggcaagccgcctgtattggcgctgaccgcaacagcgacaaaagaaacgctcagt
gatgtgacggaggttctcggacttgagcatgcagtgcgccatctatattctgtcaaccgg
ccgaatattcttttgacggttgaacatttggctgataatgccgaaaaaattagcaggatt
attgagcttgccgaaaagcttgaaggcccgggcatcgtgtattgtccgaccagaaagtgg
gcggaagagcttgcggctgagctgaacgaaaaaacgggaaagcggacggattattatcat
ggagggatggatacaggcgacagaattttaatccagcagcaatttatccataaccagctt
gattgcatttgctgcaccaatgcgttcggcatgggtgtggacaagtctgatatccgcttt
gtcattcacttttatcctccccaaacggctgaggcctttatgcaggaaatcggcagagcg
ggacgcgacggcagccctagtgtcagtattttgctgagagcgcctggcgatacagagctt
cagcagcagattattcagacagaaagcttgtctgattatgatctggaaggcattctggcc
atcatccgggacgccggtacgagcgatgagcgaaagcttcgggacgttcttataagtaag
ggcgttcaggaaacgcaggcgcgaacggccatccacctgtatctgcagggaaaaaccaca
aaagagcagctgcaggaagaactgacatatcgcgtggaaaagaagctgcataaaatgaac
cgcttttcggcgttattggagcggaaagaatgtataagaaaagcgctgttggcttacttt
gatgaatcgtatgagcctgaagatcaaacaggacaatgctgcagcagctgcggagttgat
ctggccccgtacgagcaaaaaggagaacggaaaaacatggagcggtttgaagattggaag
atggaattaggccggattttcggtttagagtctgcgggtgagttgagctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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