KEGG   Balaenoptera acutorostrata scammoni (minke whale): 103020032
Entry
103020032         CDS       T03086                                 
Symbol
DDX58
Name
(RefSeq) DExD/H-box helicase 58
  KO
K12646  ATP-dependent RNA helicase DDX58 [EC:5.6.2.6]
Organism
bacu  Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04064  NF-kappa B signaling pathway
bacu04622  RIG-I-like receptor signaling pathway
bacu04623  Cytosolic DNA-sensing pathway
bacu05160  Hepatitis C
bacu05161  Hepatitis B
bacu05162  Measles
bacu05164  Influenza A
bacu05168  Herpes simplex virus 1 infection
bacu05169  Epstein-Barr virus infection
bacu05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:bacu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    103020032 (DDX58)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    103020032 (DDX58)
   04623 Cytosolic DNA-sensing pathway
    103020032 (DDX58)
 09160 Human Diseases
  09172 Infectious disease: viral
   05161 Hepatitis B
    103020032 (DDX58)
   05160 Hepatitis C
    103020032 (DDX58)
   05171 Coronavirus disease - COVID-19
    103020032 (DDX58)
   05164 Influenza A
    103020032 (DDX58)
   05162 Measles
    103020032 (DDX58)
   05168 Herpes simplex virus 1 infection
    103020032 (DDX58)
   05169 Epstein-Barr virus infection
    103020032 (DDX58)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:bacu04054]
    103020032 (DDX58)
Enzymes [BR:bacu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103020032 (DDX58)
Pattern recognition receptors [BR:bacu04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   103020032 (DDX58)
SSDB
Motif
Pfam: CARD_2 RIG-I_C-RD RIG-I_C DEAD ResIII Helicase_C AAA_22 CCDC85 AAA_25
Other DBs
NCBI-GeneID: 103020032
NCBI-ProteinID: XP_007176908
Position
Un
AA seq 926 aa
MTAEQLQSLHAFRDHVRNFVDSTYILSYVTPWFRDDEVQHIQAEKNNKGPMEAASLFLQF
LLELQEESWFCSFLDALDQAGYSGLDDAIESWDFQKIERLEEYRLLLKHLQPEFKSTINP
KGILPEISERLINQECEEIIQICSIKGLMASAEKMVECLLRSDKENWPKTLKLALEKEES
KFSELWMVEKGAKDVKMKDLEDDEMKTLDVQIFCREEPENQNLSQNSCPSSEVPHTCSPL
KPRNYQLELALPAQKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAIQLP
VYEQQKSVFSKYFERLGYKVGGISGVTSDSISVEQTVENNDIIILTPQILVNSLKNGTIP
SLSVFTLMIFDECHNTSKHHPYNMIMFNYLDQKLGGSSDSLPQVMGLTASVGTGDAKNTA
EATEYFCKLCASLDTSVVATVKDNLEELEEIVYKPQKFFRKVESRTTDRFKCNISQLMVE
XQSLVKSIFEELGTITLENLSQIQNRNFGTQRYEQWIIAAQKVRMVFQMPXDEERRICKA
QFFYTSRFNRYNDALIINERARMKNALDYLKDFFRNVRAAGFDEIEQALTQRFEEKLQEL
ESISMDPSNENPKLKDLCFILQEEYHLSPETRIILFGKNKALVDALKKWIEENPKLSFLK
PGILTGRGRTNQKIGMTLPVQKCVLDAFRTDGDNKILIATSVADEGIDIAQCNLVLLYEY
VGNVIKMIQTRGRGRARGSKCFLLTSNMNDSILSLQTXDEAVFKEKVCQIQIHEKFIRDN
QGKAKPGLDKENKKLLCRKCKTFACYTVDIRVMEECHFIVVGVAFREHFVSKLHPRPKSF
GSFEKRAKIFCAREDCSYDWGIHGKYKVFEIPVIKIQSFVVEDVATGAQTLYAKWKDFHF
ETIPFDAAEMSTXAQDLSLQGMGDLE
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgaccgccgagcagctgcagagtctgcatgccttccgggaccatgtcaggaacttcgtg
gactctacctacatcctgagctacgtgacgccctggtttagggacgatgaggtgcagcat
attcaggctgagaaaaacaacaagggcccaatggaggctgcctcactttttctccagttc
ctgttggagctccaggaggaaagctggttctgcagctttttggatgcccttgaccaagca
ggttattctggacttgatgatgccattgaaagttgggatttccaaaaaattgaaaggttg
gaggagtatagattacttttaaagcatttacaaccagaatttaaatccacgatcaatcca
aaaggtatccttcctgaaatatctgaacgtttaattaatcaggaatgtgaagaaattatt
cagatttgttccatcaaggggctgatggcaagtgcagagaaaatggttgaatgccttctc
agatcagacaaggagaactggcccaaaactttgaaacttgcattggagaaagaagagagc
aagttcagtgaactgtggatggtagagaaaggtgcaaaagatgtcaaaatgaaagatctt
gaggatgatgaaatgaaaactttggatgtacagattttctgcagggaagaaccagaaaac
cagaatcttagtcagaattcatgcccttcttcagaagtgcctcatacttgcagcccattg
aagccaagaaattaccaactagagcttgctttacctgctcagaaaggaaaaaacacaata
atatgtgctcctactggttgtggaaaaacctttgtttcacttcttatatgtgaacatcat
cttaaaaaatttccacaaggacaaaaggggaaagttgtcttttttgctattcaactccca
gtgtatgagcagcagaaatctgtgttctcaaagtattttgaaagacttgggtacaaagtt
ggaggcatttctggagtaacatctgacagtatctcagtggaacagactgttgagaacaat
gacatcatcattttaactccacagattcttgtgaacagccttaaaaatgggacgattcca
tcactctctgtctttactttgatgatatttgatgaatgccacaacactagtaaacatcat
ccttacaatatgatcatgtttaattatctagatcagaaacttggaggatcttcagactca
ttgccccaggtcatggggctgactgcctcggttggcactggggatgccaaaaatacagct
gaagccacagaatatttctgcaaattgtgtgcttctcttgacacatcagtggtagcaaca
gtcaaagacaacttggaggaactggaggagattgtttataagccccagaagtttttcagg
aaagtggaatcacggaccaccgacagatttaaatgcaacatatctcagttgatggtagag
nnacagagtctggtaaagagtatctttgaagaacttggtaccataactctcgaaaactta
tctcaaattcaaaataggaattttggaacacagagatatgaacagtggattatcgcagct
cagaaagtgcgcatggtgtttcagatgccanaagatgaagagagaaggatttgtaaagca
cagtttttctacacgtcgcgtttcaacagatacaatgatgccctcattatcaatgagcgt
gctcgaatgaaaaatgctctggattacttaaaagacttcttcagaaatgtccgagcagca
ggatttgatgagattgagcaagctctcactcagagatttgaagaaaagctgcaggaacta
gaaagtatttccatggatcccagcaatgagaaccctaaactcaaagatctctgcttcatc
ttgcaagaagagtaccacttaagcccagagaccagaatcatcctctttgggaaaaacaaa
gcactcgtggatgctttaaagaaatggattgaagaaaatcctaagctcagctttctaaaa
cctggcatattgactggacgtggcagaacaaatcagaaaataggaatgaccctcccagta
cagaagtgtgtattggatgcattcagaaccgacggagataacaagattctgattgccacc
tcggttgctgatgaaggtattgacattgctcagtgcaatctggtcctcctatatgagtat
gtgggcaatgtcatcaaaatgatccaaaccagaggcagaggaagagcaagagggagcaag
tgcttccttctgactagtaatatgaatgactccattttaagcctgcagacgtgagatgaa
gcagtatttaaagaaaaggtttgccagatacagattcatgaaaaattcatcagggataat
caaggaaaagcaaaacctgggcttgataaggaaaataaaaaactgctctgcagaaagtgc
aaaacctttgcatgttatacagttgatataagagtgatggaggaatgccatttcattgtg
gttggagttgctttcagggagcactttgtgagtaagttacaccccagaccaaagagcttt
gggagttttgagaagagagcaaagatcttctgtgccagggaggactgcagctatgactgg
ggaatccatgggaagtataaggtatttgagattccagttataaagattcaaagttttgtg
gtggaagatgttgcaactggagctcagacactgtatgcaaagtggaaggactttcatttt
gagaccatcccatttgatgctgcagaaatgtccacttgagctcaggacctcagtctgcag
ggaatgggtgaccttgagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (10)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (38)   

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