KEGG   Bacillus atrophaeus: BATR1942_19150
Entry
BATR1942_19150    CDS       T01339                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bae  Bacillus atrophaeus
Pathway
bae03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bae00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BATR1942_19150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bae03021]
    BATR1942_19150
   03400 DNA repair and recombination proteins [BR:bae03400]
    BATR1942_19150
Enzymes [BR:bae01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BATR1942_19150
Transcription machinery [BR:bae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BATR1942_19150
DNA repair and recombination proteins [BR:bae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BATR1942_19150
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 Peptidase_M23 Apocytochr_F_C
Other DBs
NCBI-ProteinID: ADP34747
UniProt: A0A0H3E642
Position
3748435..3752034
AA seq 1199 aa
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGSKFQASMGAEAINKLLQ
DIDLVKEVDTLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTDEQRSKLLITTVGKLIFNEILPESFPYMNEPTKSNIEEKTPERFFLEKGA
DVKAVIEQQPVNAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFRYSTKAGITVGV
SDIVVLDDKQEILEEAQGKVDNVLKQFRRGLITEEERYERVISIWSSAKDVIQGKLMQSL
DEVNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKPLREGTEIIERLE
ERLIGRFSRKQVRHPETDEVLVNENELIDEDKALEIVESGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARHPKGQATISEIDGKVAEINEVRDKQQEVVIQGAVETRSYTAPYNSRLKVTVGDEITR
GQVLTEGSIDPKELLKVTDITSVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGSLLDIHQFTEANKKVLLKGDRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMKYRKVQPISKVQPTDDMVPVE
NT seq 3600 nt   +upstreamnt  +downstreamnt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccggataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacgttaaaa
cctgaaaaggacggcctgttttgcgaacgcattttcggaccaactaaggactgggaatgt
cattgcgggaagtacaagcgagttcgttataaaggcgttgtttgtgaccgttgcggagtt
gaagtaacgagggctaaagtccgtcgtgagagaatggggcatattgaacttgctgcccct
gtttctcacatttggtatttcaaaggaatcccaagccggatgggacttgtactggatatg
tcaccgcgtgcattggaagaagtgatttactttgcttcttacgttgttacagacccggca
aacacaccgcttgaaaagaaacagcttttatctgaaaaggaataccgtgcgtatcttgat
aaatacggcagcaaattccaagcgtcaatgggtgcggaagcgattaataagcttcttcaa
gacattgatctggtaaaagaagtggacacgttaaaagaagagctgaaaacatctcaagga
cagcgccgtacgcgtgcgatcaaacgccttgaagtattggaagccttccgtaactcagga
aacaagccttcatggatgatccttgacgtgcttcctgttatcccgcctgagcttagaccg
atggttcagcttgatggcggacgttttgcgacgtctgacttgaacgacctttaccgtcgt
gttatcaaccgtaacaaccgtttaaaacgtcttttggatcttggtgcgccaagcatcatc
gttcaaaacgaaaaacgtatgctgcaagaagctgtcgatgctttaattgataacggacgc
cgcggacgacctgttaccggtcctggtaacagaccgttgaaatctttatcacatatgctg
aaagggaaacaaggacgtttccgtcaaaaccttcttggtaaacgtgtcgattactccgga
cgttctgtaatcgtcgtaggtcctcatttgaaaatgtatcaatgcggtctgccgaaggaa
atggcgcttgaactcttcaaacctttcgtcatgaaagagcttgtcgaaaaaggccttgca
cataatattaaaagcgcaaaacgtaaaattgagcgagtacagcctgaagtatgggatgta
ttagaatcagtcattaaggagcatccggttcttttaaaccgtgcacctacgcttcacaga
ctcggaattcaggcgttcgaaccaacacttgttgaaggtcgcgcaatccgtcttcatccg
ctcgtatgtacagcttataacgctgactttgacggagaccaaatggcggttcacgttccg
ttatctgcagaagcacaagctgaggctcgtattcttatgcttgctgctcaaaacatcttg
aaccctaaagatggtaaaccggttgttacaccgtctcaggatatggtattaggaaactac
tacttaactcttgagcgtgccggagctgtcggtgagggtatggtctttaaaaatacagat
gaggcgcttcttgcttatcaaaacggatatgttcatcttcatacgagagtagctgttgca
gctaactcacttaagaacgtgacatttaccgatgagcagcgatcaaaactgttaattaca
accgttggaaaacttattttcaatgaaattcttcctgaatcattcccttatatgaatgag
cctacgaagagcaatattgaagaaaagacacctgagcgcttcttcttagaaaaaggtgcc
gatgtaaaagctgtgatcgaacaacagcctgtcaacgcaccgtttaagaaaggcatttta
ggtaaaatcattgcggagatctttaaaagattccacattaccgaaacatctaaaatgctt
gaccgtatgaagaaccttggcttcagatattcaacaaaagccggtattacagtaggggtt
tccgatatcgtcgttcttgatgataaacaagaaatccttgaagaagcacagggcaaagtt
gacaatgtgttgaagcagttcagacgtggtctgattacggaagaagaacgttatgaacga
gtgatttcaatttggagttcggctaaagatgtaatccaaggtaaactgatgcaatcatta
gatgaagtcaacccgatttacatgatgagtgactcaggtgcccgtggtaacgcatctaac
tttacgcagcttgcgggtatgcgtggtctgatggccaacccggctggacgaatcattgaa
ttaccgatcaaatcaagtttccgtgagggtcttactgtattggaatactttatctctact
cacggtgcacgtaaaggtcttgctgatacagccttgaaaacggctgactcaggttacctt
acacgtcgtcttgttgatgttgcacaggacgttatcatccgtgaaacagattgcggaact
gaccgaggtattttggctaaaccgcttagagaaggcactgaaattatcgagcgcttagaa
gaacgtcttatcggccgtttctctagaaaacaagtaagacatcctgaaacagatgaagtg
cttgtgaacgaaaacgaactgattgatgaagataaagctctcgaaattgttgaatctggt
attgaagaagtctggatccgttccgcgtttacatgtaacacgcctcatggtgtgtgtaaa
cgatgctacggccgaaatcttgctacaggcactgatgttgaggttggagaagcagtcgga
atcatcgctgcccaatctatcggagagcctggtacacagttaacaatgcgtaccttccat
acaggcggggttgcaggagacgatattacacaaggtcttccgcgtatccaagagcttttc
gaagcgcgtcatcctaaaggtcaagcgacaatttctgaaattgacggtaaagttgccgaa
attaatgaagtccgtgataagcagcaggaagttgtgattcaaggcgcggttgaaacacgt
tcgtatacggctccttataattctcgccttaaagttacggttggagatgaaattactcga
ggccaagttctgacagaaggatcaattgatccgaaagaacttctcaaagtaactgatatt
acatcagttcaagagtatcttcttcatgaggttcaaaaggtttaccgtatgcaaggtgtg
gaaatcggtgataaacacgtagaagtaatggttcgccaaatgcttcgcaaagtccgtgta
attgatgccggagatactgatgtacttcctggctcattgcttgatattcaccaatttact
gaagcgaacaaaaaagtattgcttaaaggcgatcgtccagctactggccgtcctgtctta
ctcggtattacaaaagcttcgcttgaaactgactcattcttatcagctgcttccttccag
gaaacaacacgtgtccttacagatgcagcaattaaaggtaagcgtgatgaacttctcggc
ctgaaagaaaatgttatcatcggtaaacttgttccggctggtacaggtatgatgaaatac
cgaaaagtacagccgatttcaaaggtacagccgactgatgatatggtgccggttgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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