KEGG   Heyndrickxia coagulans 36D1: Bcoa_2524
Entry
Bcoa_2524         CDS       T01628                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bag  Heyndrickxia coagulans 36D1
Pathway
bag03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Bcoa_2524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bag03400]
    Bcoa_2524
Enzymes [BR:bag01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Bcoa_2524
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Bcoa_2524
DNA repair and recombination proteins [BR:bag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Bcoa_2524
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Zn-ribbon_8 NFACT_N Auto_anti-p27 DZR
Other DBs
NCBI-ProteinID: AEP01702
UniProt: G2TPH3
Position
2757459..2758292
AA seq 277 aa
MPELPEVETIRRTLAQLVAGETIESVTVLLPKMVKKPLHTEAFADALAGETIRSLGRRGK
FLIFYTDHYALVSHLRMEGRYRVYDQNEPVEKHTHMIFHFQSGKELRYKDVRKFGTMHLF
LKGEELSSLPLSKLGPEPLSDTFTEKYLYGQLKKTERNVKSCLLDQTVISGLGNIYVDES
LFRAHIYPERKAKSLTKKDVHLLHSEIIQTLQEAVEKGGSTVRSYVNSQGQMGMFQLELY
VYGRKGEPCRKCGTPIEKMVTAGRGTHYCPNCQKKRR
NT seq 834 nt   +upstreamnt  +downstreamnt
atgccggaattaccggaagtggaaacgatacgaagaacgctggcacagctcgttgctggc
gaaacgattgaaagcgtaacggtgcttttgccaaaaatggtcaaaaagccgcttcacaca
gaggcgtttgccgatgctctggccggtgaaacgatccgttcgctcgggcggcgcggcaaa
tttctcattttttacacggaccattacgcgcttgtctcccatttgcgcatggaagggcga
taccgggtttatgaccaaaatgaaccggttgaaaagcatacgcatatgatttttcatttt
caatccggaaaggaactaaggtacaaagatgtccgcaaatttgggacaatgcatttgttt
ttaaagggggaggaattgtcctctctcccgctttcaaaactcggccctgagccgctatcc
gatacgtttacggaaaaatatttatacggccaactaaagaaaacggaacgcaatgtcaaa
tcctgtttgctcgatcagacggtcatttccgggctcgggaacatttatgtggacgaatcc
ttgttccgtgctcacatctatccggagcgaaaagcaaagtcactgacaaaaaaagacgtg
catcttttacacagcgagatcattcaaacgttgcaggaagccgttgaaaaaggcggcagc
acggtccgttcctatgtaaattcgcaaggacagatgggcatgttccagctcgagctgtat
gtttacggccggaaaggggagccgtgccggaaatgcggcaccccgattgaaaagatggtt
acagcaggccgcggcacccattactgcccgaattgccaaaagaaacgcagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system