KEGG T03908: BsLM

Bacillus sp. LM 4-2: BsLM_2470

Entry

BsLM_2470         CDS       T03908

Name

(GenBank) endonuclease IV

K01151

deoxyribonuclease IV [EC:3.1.21.2]

Organism

balm Bacillus sp. LM 4-2

Pathway

balm03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:balm00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BsLM_2470
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:balm03400]
    BsLM_2470
Enzymes [BR:balm01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     BsLM_2470
DNA repair and recombination proteins [BR:balm03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BsLM_2470

SSDB

Motif

Pfam:

AP_endonuc_2 OST3_OST6

Other DBs

NCBI-ProteinID:

AKE24268

Position

complement(2437585..2438478)

AA seq 297 aa
MLRIGSHVSMSGKHMLLAASQEAVSYGANTFMIYTGAPQNTRRKKIEDLNIEAGRAHMQE
NGIDEIVVHAPYIINIGNTTNPSTFELGVDFLRSEIERTAAIGARQIVLHPGAHVGAGAE
AGIKKIIEGLNEVIDPNQNVQIALETMAGKGSECGRSFEELAQIIEGVTHNEQLSVCFDT
CHTHDAGYNIVEDFDGVLNEFDKIIGIDRIKVLHINDSKNVKGARKDRHENIGFGEIGFD
ALQYVVHHEQLKDIPKILETPYVGEDKKNKKPPYRFEIEMLKEKQFDDTLLEKILQQ

NT seq 894 nt +upstreamnt +downstreamnt
ttgttgagaataggctcacacgtctctatgagcggaaaacatatgcttctggctgcaagc
caggaagcagtctcttatggggcgaatacgtttatgatctatacaggcgcaccgcaaaat
acgcgccgaaagaaaattgaagacttaaatatagaagcaggccgggcacatatgcaagaa
aatggcattgacgagattgtcgtacacgcgccttatattattaatattggcaacacgaca
aatccgtccacttttgagctgggtgttgattttcttcgttcagaaattgaacggacagcg
gccatcggagcgaggcaaattgtccttcatcctggcgctcacgtaggggcaggagctgaa
gccggcatcaaaaaaattattgaaggcttaaatgaagtgattgatccgaatcaaaatgtc
cagattgcattagaaacaatggctggaaaaggatcagaatgcggcagaagctttgaggag
cttgcgcagattatcgaaggcgttacacacaatgagcagctgtcagtgtgctttgacacg
tgccatacacatgatgccgggtataacattgtcgaagactttgacggagtgctaaatgag
ttcgataaaatcattggcattgaccgtattaaagtgcttcatatcaatgacagcaaaaat
gtcaaaggtgcgagaaaagaccgccatgaaaatattggctttggtgaaataggttttgac
gcactgcaatatgttgttcaccatgagcagttaaaagacattccaaaaattcttgaaaca
ccatacgtcggtgaagataaaaagaacaaaaaaccgccataccgttttgagattgaaatg
ctgaaagaaaaacaatttgatgatacattgctcgaaaagattttacagcaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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