KEGG   Burkholderia ambifaria AMMD: Bamb_0461
Entry
Bamb_0461         CDS       T00398                                 
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam00470  D-Amino acid metabolism
bam00550  Peptidoglycan biosynthesis
bam01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bam00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Bamb_0461
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Bamb_0461
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bam01011]
    Bamb_0461
Enzymes [BR:bam01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     Bamb_0461
Peptidoglycan biosynthesis and degradation proteins [BR:bam01011]
 Precursor biosynthesis
  Amino acid ligase
   Bamb_0461
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C
Other DBs
NCBI-ProteinID: ABI86020
UniProt: Q0BIK3
Position
1:522527..524035
AA seq 502 aa
MFGDRQRPMVLVLGLGESGLAIARWCARHGCRLRIADTREAPPNLAALQAEGIDAEFVGG
PFTPALLDGGVEIVGLSPGLSPLEPALAALIAAANERAIAVWGELEFFAQALRALGTSGY
QPKVLAITGTNGKTTTTNLTGLLCQRSGKKVAVAGNISPAMLDRLARAIDETALPDVWVL
ELSSFQLETARTFAPDAAAILNITQDHLDWHGSFDAYAAAKGRIFGATTTRVLNRDDAAV
MKFAPAAGAADAARTVTFGLNEPAQQGDYGLSRDNGIAWLVEAVDRDAPDETTSRRRKRD
GAHTPDIAQKRLMPADALRIRGLHNAANALAAFALARAIDLPAAPLLHALREYRGEAHRV
EVIATIDDVDYVDDSKGTNVGATVAALDGLAQKIVLIAGGDGKGQDFAPLVAPVARWCRA
VMLIGRDAPAIRDTLAETGVPLADHATLEAAVHAAAELAEPGDAVLLSPACASLDMFRNY
AHRADVFRAAVDEIAIDKGATT
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgtttggagatcggcagcggccgatggtgctcgtactggggctcggggaatcgggcctc
gcgatcgcgcgatggtgcgcgaggcacgggtgccggctgcgtattgccgatacccgcgag
gcgccgcctaaccttgccgcgctgcaggccgaaggcatcgatgccgagttcgtcggcggg
ccgttcacgcccgcgctgctcgacggcggtgtcgagatcgtcggcctgagccctggcctg
tcgccgctcgaaccggcactcgccgcgctgatcgcggccgcgaacgagcgcgcgatcgcg
gtgtggggcgagctcgaattcttcgcgcaggcgctgcgcgcgctcggcacgagcggctac
cagccgaaggtgctcgcgatcaccggcaccaacggcaagaccacgacgacgaacctcacg
ggcctgctgtgccagcgttcgggcaagaaggtcgcggtcgccggcaacatcagcccggcg
atgctcgaccggctcgcgcgcgcgatcgacgagacggcgctgcccgacgtctgggtgctc
gaactgtcgagcttccagctcgagacggcgcgcacgttcgcgcccgacgcggccgcgatt
ctcaacatcacgcaggatcacctcgactggcatggcagcttcgacgcgtatgcggcggcg
aagggccggatcttcggcgcgacgaccacccgcgtgctcaatcgcgacgatgcggccgtg
atgaagttcgcgccggccgccggcgcggccgatgcggcgcgcacggtcacgttcggcctg
aacgaaccggcgcagcagggcgactacggcctgtcgcgcgacaacggcatcgcgtggctg
gtcgaggcggtcgaccgcgacgcgccggacgagacgacgagccgccggcgcaagcgcgac
ggcgcgcatacgcccgacattgcacaaaagcgcctgatgccggccgacgcgctgcgcatc
cgcgggctgcacaacgcggcgaacgcgctggccgcgttcgcgctcgcgcgtgcgatcgac
ctgccggccgcgccgctgctgcacgcgctgcgcgaataccgcggcgaagcgcatcgcgtc
gaagtgatcgcgacgatcgacgacgtggactacgtcgacgacagcaagggaaccaacgtc
ggcgcgacggtggccgcgctcgacggactcgcgcagaagatcgtgctgatcgcgggcggt
gacggcaaggggcaggatttcgcgccgctcgtcgcgcccgtcgcgcggtggtgccgcgcg
gtgatgctgatcggccgcgatgcgccggcgatccgcgacacgctcgccgagacgggcgtg
ccgcttgccgaccacgcgacgctcgaggcggcggtgcatgcggcggccgagctcgcggag
ccgggcgacgcggtgctgctgtcgcccgcttgcgcgagcctcgacatgttcaggaactac
gcccaccgcgctgacgtgttccgcgcggccgtggacgaaatcgccatcgacaaaggagcg
acgacatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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