KEGG   Burkholderia ambifaria AMMD: Bamb_1105
Entry
Bamb_1105         CDS       T00398                                 
Name
(GenBank) hydroxymethylpyrimidine synthase
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam00730  Thiamine metabolism
bam01100  Metabolic pathways
bam01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:bam00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    Bamb_1105
Enzymes [BR:bam01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     Bamb_1105
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-ProteinID: ABI86664
UniProt: Q0BGQ9
Position
1:complement(1213423..1215354)
AA seq 643 aa
MNANPKFLSADAHVDAAAVAPLPNSRKVYVTGSQPDIRVPMREITQADTPTGFGGEKNPP
IYVYDTSGPYTDPDAKIDIRAGLPALRQGWIEARGDTEVLDGLSSQYGLERAADPATADL
RFPGLHRNPRRAQPGKNVTQMHYARQGIITPEMEYIAIRENQRRAEYIESLKSSGPNGAK
LAAMMGRQHPGQAFGAAAFGANALAEITPEFVRDEIARGRAIIPANINHPESEPMIIGRN
FLVKINANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPI
GTVPIYQALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTANRMTGI
VSRGGSIMAKWCLAHHKESFLYEHFEEICEIMKAYDVSFSLGDGLRPGSIYDANDEAQLG
ELKTLGELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLDWCKEAPFYTLGPLTTDIAP
GYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHP
GAQVRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSM
KITQDVREFAAQQGVSETEALKKGMEVKAVEFVKTGAEIYHRQ
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgaacgccaatccgaagtttctgtccgccgacgcccacgtcgatgccgctgccgtcgcg
ccgctgcccaattcgcgaaaggtttatgtaaccggctcgcagcccgacatccgcgtgccg
atgcgtgaaatcacgcaggccgacacgccgaccggcttcggcggcgaaaagaatccgccg
atctacgtgtacgacacgtcgggcccgtacacggatccggacgcgaagatcgacatccgc
gcgggcctgcccgcgctgcgccagggctggatcgaagcgcgcggcgacaccgaagtgctc
gacggcctgtcgagccagtacggcctcgagcgcgcggccgacccggccaccgccgacctg
cgtttcccgggcctgcaccgcaacccgcgccgcgcgcagccgggcaagaacgtcacgcag
atgcactacgcgcgtcagggcatcatcacgccggaaatggaatacatcgcgatccgcgag
aaccagcgccgcgccgagtacatcgagagcctgaagtcgagcggcccgaacggcgcgaag
ctcgccgcgatgatgggccgccagcacccgggccaggcgttcggcgccgcggccttcggc
gcgaacgcgctcgccgagatcacccccgagttcgtgcgcgacgaaatcgcgcgcggccgc
gcgatcatccccgcgaacatcaaccacccggaatccgagccgatgatcatcggccgcaac
ttcctcgtgaagatcaacgcgaacatcggcaactcggccgtcacgtcgtcgatcggcgag
gaagtcgacaagatgacgtgggcgatccgctggggcggcgacaccgtgatggacctgtcg
accggcaagcacatccatgaaacgcgcgagtggatcatccgcaacagcccggtgccgatc
ggcacggtgccgatctaccaggcgctcgaaaaggtcaacggcaaggccgaggatctcacc
tgggaaatcttccgcgacacgctgatcgagcaggccgagcaaggcgtcgactacttcacg
atccatgcgggcgtgcggctgcagtacgtgccgctcaccgcgaaccggatgacgggcatc
gtgtcgcgcggcggctcgatcatggcgaagtggtgcctcgcgcatcacaaggaaagcttc
ctgtacgaacacttcgaagagatctgcgagatcatgaaggcgtacgacgtgagcttctcg
ctcggcgacggcctgcgtcccggctcgatctacgacgcgaacgacgaagcgcagctcggc
gaactgaagacgctcggcgagctcacgcagatcgcatggaagcacgacgtgcaggtgatg
atcgaaggccccggccacgtgccgatgcagctgatcaaggagaacatggatctccagctc
gactggtgcaaggaagcgccgttctacacgctcgggccgctgaccaccgacatcgcaccg
ggctacgaccacatcacgtcgggcatcggcgccgcgatgatcggctggttcggcaccgcg
atgctgtgctacgtgacgccgaaggaacacctcggactgccgaacaaggacgacgtgaag
gaagggatcatcacgtacaagcttgccgcgcacgcggccgacctcgccaagggtcacccc
ggcgcgcaggtgcgcgacaacgcgctgtcgaaggcgcgtttcgagttccgctgggaagac
cagttcaacatcggcctcgatccggacaaggcgcgcgaattccacgacgagacgctgccg
aaggactcggcgaaggtcgcccacttctgctcgatgtgcggcccgcacttctgctcgatg
aagatcacgcaggacgtgcgcgagttcgccgcgcagcagggcgtgtcggaaaccgaggcg
ctgaagaaggggatggaagtcaaggcggtcgagttcgtgaagaccggtgcggagatctat
caccgtcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system