KEGG   Burkholderia ambifaria AMMD: Bamb_2858Help
Entry
Bamb_2858         CDS       T00398                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bam00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Bamb_2858
Enzymes [BR:bam01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Bamb_2858
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Bamb_2858
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1:complement(3152050..3152904)
Genome map
AA seq 284 aa AA seqDB search
MNAVSDPQNMPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVL
AVERRGKYLLFEVDAGWFIVHLGMTGTLRVLPAAGVPVAAKHDHIDWIFDEFVLRFRDPR
RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV
GVGNIYASESLFRAGIRPTTAAGKVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNG
ESGYFQLDCFVYDRAGLPCRVCGTPIRQIVQGQRSTYFCPTCQR
NT seq 855 nt NT seq  +upstreamnt  +downstreamnt
gtgaatgccgtttcagacccgcaaaacatgccagagttgccagaagtcgaagtcacgcgc
cggggcatcgagccctttgtcgcgggccgccgcgtcgagcgtgtcgacgtccgtaccgcg
atgctgcgctggcccgtgccggcggggctcgcggagcaattgcgcgcgcgcgaggtgctc
gccgtcgagcgtcgcggcaagtacctgctgttcgaggtcgacgcgggctggttcatcgtg
catctcgggatgacgggcacgctgcgcgtgctgcccgcggccggcgtgccggtcgccgcg
aaacacgaccacatcgactggatcttcgacgagttcgtgctgcgctttcgcgatccgcgc
cgtttcggcgccgtgttgtggcacccgcgcgaagcgggcgacgtgcatgcgcatccgctg
ctcgcgagcctcggcgtcgagccgttctcgccggcattcaccggcgcgctgctgcacgcg
cgcacgcgcgggcgcacggtgtcggtcaagcaggcgctgctcgcgggcgacatggtggtc
ggcgtcggcaacatctatgcgtcggagagcctgtttcgcgccggcatccggccgacgacc
gccgccggcaaggtctcgctgccgcgctacgagcgactggccgatgcggtgcgcgcgacg
ctcgccgacgcgatcgagcgcggcggcagcacattgcgcgactttgtcggcagcaacggc
gaaagcggctatttccagctcgactgcttcgtctacgaccgtgcggggctgccttgccgc
gtatgcggcacgccgatccgccagatcgtgcagggccagcgctcgacctatttctgcccg
acctgccagcgttga

DBGET integrated database retrieval system