KEGG T00398: Bamb

Burkholderia ambifaria AMMD: Bamb_3350

Entry

Bamb_3350 CDS T00398

Gene name

trpA

Definition

tryptophan synthase subunit alpha (EC:4.2.1.20)

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

bam Burkholderia ambifaria AMMD

Pathway

bam00260	Glycine, serine and threonine metabolism
bam00400	Phenylalanine, tyrosine and tryptophan biosynthesis
bam01100	Metabolic pathways
bam01110	Biosynthesis of secondary metabolites
bam01230	Biosynthesis of amino acids

Module

bam_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:bam00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bam00400]

SSDB

Motif

Pfam:

Trp_syntA Peripla_BP_6 PcrB His_biosynth BtpA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2:143314..144132

AA seq 272 aa
MSTRIQQTFAALAEQGRKGLIPFITAGDPDPAKTVEFMHALAEGGADVIELGVPFSDPMA
DGPVIQRSSERALARGVTLKSVLADVKCFRETNQTTPVVLMGYANPIERMGVDAFATEAQ
AAGVDGVLVVDYPPEEAGVFAEKMRAAQIDPIFLLAPTSTDERIADVGKIASGYVYYVSL
KGVTGAGNLDVSSIAGKIPAIKSRVPVPVGVGFGIRDAETARAVAEVSDAVVIGSRLVQL
LESAAPEGAAAALKTFIAELRAALDGAGKTAR

NT seq 819 nt +upstreamnt +downstreamnt
atgtccacccgtatccagcagaccttcgccgcactcgccgaacaaggccgcaagggcctg
atcccgttcatcacggccggcgaccccgatcccgcgaagacggtcgagttcatgcacgcg
ctcgccgaaggcggcgccgacgtgatcgagctcggcgtgccgttctcggacccgatggcc
gacggcccggtgatccagcgctcgtcggagcgcgcgctcgcgcgcggcgtcacgctcaag
agcgtgctcgccgacgtgaagtgcttccgcgagaccaaccagacgacccccgtcgtgctg
atgggctatgcgaacccgatcgagcggatgggcgtcgacgcgttcgccaccgaagcgcag
gcagccggcgtcgacggcgtgctcgtcgtcgactatccgcccgaggaagccggcgtgttt
gccgagaaaatgcgtgccgcgcagatcgatccgatcttcctgctcgccccgacgtcgacc
gacgagcgcatcgccgacgtgggcaagatcgcgagcggctacgtgtactacgtgtcgctc
aagggcgtgaccggcgccggaaatctggatgtttcgagcattgcgggtaaaatcccggcc
atcaagtcgcgcgtgccggttccggtgggcgtcggcttcggcatccgcgacgccgaaacg
gcgcgcgcggtggccgaagtgtcggacgccgtcgtgatcggcagccgcctggtgcagctg
ctcgagagcgccgcgccggaaggcgccgccgccgcgctgaagacattcatcgccgagctg
cgcgccgccctggacggcgccggcaagacggcgcgataa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BAM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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