KEGG T00398: Bamb

Burkholderia ambifaria AMMD: Bamb_5971

Entry

Bamb_5971 CDS T00398

Definition

AMP-dependent synthetase/ligase

Orthology

K01895

acetyl-CoA synthetase [EC:6.2.1.1]

Organism

bam Burkholderia ambifaria AMMD

Pathway

bam00010	Glycolysis / Gluconeogenesis
bam00620	Pyruvate metabolism
bam00640	Propanoate metabolism
bam00680	Methane metabolism
bam01100	Metabolic pathways
bam01110	Biosynthesis of secondary metabolites
bam01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:bam00010]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:bam00620]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:bam00640]
Metabolism; Energy metabolism; Methane metabolism [PATH:bam00680]

SSDB

Motif

Pfam:

AMP-binding AMP-binding_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

3:complement(507916..509589)

AA seq 557 aa
MRDGATAREVPAYADAVAGFRIETATAYLHGDLEQGLNACVECCDRHAAADPNAIALDWI
DAGGRHRSFTFAQMQALSARVANLLVEQGVKPGDVVAGLLPRTPELVATILGTWRAGAVY
QPLFTAFGPKAIEHRLRMSDARLIVTNIANRAKLDEIVDCPPVATVREPGDTLPARDIDF
RTALDAQSGRFEPVLRKGTDLFMMMSTSGTTGLPKGVPVPLRALLAFGAYMRDAVDLRDS
DRFWNIADPGWAYGLYYAITGPLLLGHATTLYEGSFTVDSTCDVIERLGITSLAGSPTAY
RMLMAAGTEVAARLKGQLRVVSSAGEPLNPEVVRWFHAALGAPIHDHYGQTELGMVVNNH
HGLTHVVHVGSAGLAMPGYRVAVLDEAGRELGPGEPGNLAIDIARSPLLWFTGYWQQDTP
AIAGGYYRTGDNVELEPDGTVSFIGRADDVITSSGYRIGPFDVESALIEHPAVSEAAVIG
VPDPERTEIVKAFVVLSKGFEGTPALADELSQHVKRRLSAHAYPRAIDFVDALPKTPSGK
IQRFVLRKMEAEKTAQS

NT seq 1674 nt +upstreamnt +downstreamnt
atgcgtgatggagcaactgcccgggaggtgccggcctacgccgacgccgtggccggcttc
cgtatcgagaccgccaccgcatatctgcacggcgacctggagcagggcctgaacgcctgc
gtcgaatgctgcgaccggcatgcggcggcggacccgaacgcgatcgccctcgactggatc
gacgctggcggccggcatcgcagcttcacgttcgcgcagatgcaggcgctgtcggcgcgc
gtcgcgaacctgctggtcgagcagggtgtgaagccgggtgatgtggtagccggcctgttg
ccgcgcacacccgaactcgtcgcgacgatcctcggcacgtggcgcgcgggggccgtctac
cagccgcttttcacagcgttcggaccgaaggcgatcgagcaccggctgcgcatgagcgat
gcgcggctgatcgtcaccaacatcgcgaatcgcgcgaagctcgacgaaatcgtggattgc
ccgccggtggcgacggtgcgcgagccgggcgacacgctgccggcccgcgacatcgatttc
cgtacggcgctcgacgcgcagtcgggcaggttcgaaccggtgctgcgcaaggggaccgac
ctgttcatgatgatgtcgacgtcgggcacgacgggtttgccgaagggcgtgccggtgccg
ctgcgcgccctgcttgcgttcggcgcgtacatgcgcgacgcggtggacctgcgcgacagc
gaccgcttctggaacatcgccgaccccggttgggcatacggtctctactatgcgatcacg
ggcccgctgctgctcggccatgcgacgacgctgtacgaaggcagctttaccgtcgacagc
acctgcgacgtgatcgaacggctcggcatcacgagcctcgccggttctccgacggcgtac
cggatgctgatggcggccggcaccgaagtggcggcgcggctgaaagggcaactgcgcgtc
gtcagtagcgcgggcgagccgctgaatccggaagtcgtgcgctggttccacgcggcgctc
ggcgcgccgatccacgatcactacggccagaccgaactcgggatggtcgtgaacaaccat
cacgggctcacgcacgtcgtccatgtcggttcggccggtctcgcgatgcccggctatcgc
gtcgcggtactcgacgaagccggtcgcgagctgggcccgggtgagcccggcaacctcgcc
atcgacatcgcacgctcgccgctgctgtggttcaccggctactggcagcaggatacgccg
gcgatcgcgggcggctactaccggaccggcgacaacgtcgagctcgagccggacggcacc
gtgagcttcatcggccgcgcggacgacgtgatcacgtcgtccggctaccggatcggcccg
ttcgacgtggaaagcgcgctgatcgagcatccggccgtcagcgaggccgcggtgataggc
gtgccggacccggagcgcacggagatcgtcaaggcgttcgtcgtgctgtcgaaaggcttt
gaaggcacgccggcgctggccgacgaactgagccagcacgtgaagcggcggctgtcggct
cacgcgtatccccgcgcgatcgacttcgtcgacgcgctgccgaaaaccccgagcggcaag
atccagcgcttcgttctgcgcaagatggaagccgagaagaccgctcaatcctga

All links

Pathway (7)   
   KEGG PATHWAY (7)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BAM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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