KEGG T00398: Bamb

Burkholderia ambifaria AMMD: Bamb_6327

Entry

Bamb_6327 CDS T00398

Definition

beta-galactosidase (EC:3.2.1.23)

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

bam Burkholderia ambifaria AMMD

Pathway

bam00052	Galactose metabolism
bam00511	Other glycan degradation
bam00600	Sphingolipid metabolism
bam01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:bam00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:bam00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:bam00511]

SSDB

Motif

Pfam:

Glyco_hydro_42 Glyco_hydro_42M Glyco_hydro_42C Glyco_hydro_2_C DUF4434 Glyco_hydro_14

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

3:929652..931622

AA seq 656 aa
MHLGVCYYPEHWPREQWARDARRMAELGLTRVRIAEFAWSRMEPEPGRYDWAWLDEAIDT
LASRQLKVILGTPTASPPKWLVDRHPEILPIGADGAVWQFGSRRHYDIASPVYREHCVRI
ADAMARRYGAHPAVIAWQTDNELGCHNTLPSYTCAALEGFRAWLAVRYGDIGALNRAWGN
VFWSMEYRGFDEIELPRHTPTDANPAHLLDFRRYQSDEVARFHAAQVDAIRPHAPGRDVL
HNFMGFFTEFDHYAFARGGLDVAAWDSYPVPRTEVLPLDEADKQRWARTGHPDVSAFSHD
LYRGVGNGRMWVMEQQAGPVNWGPYNPVPHAGAVRLWTWEAFAHGAELVSYFRWRQYPHA
QEQLHSGLNAPDDQLSPGGREVARVARELAALDPALVAGAREPARVALLFDYTADWMIRI
QPHGADFDYQQHAFDWYHALRELGLDVDIVAADADVSRYALVVVPTLPVVPDCVVEQAVR
GNAHWLFGPRTGSRTAEFAIVPGLAPGKLRDVLPVRIAQVESLRPSLAPRVAFDGVDGHA
LKWRDHIDLDASTSIVVLAACDDGVPALVRHGQVTMATACFDPALLRAIVGRCARDAGLP
VRELPDGVRLCRRGRVVFAFNYGDTPCTLPAPDGARFVLGGPELGAVDVAAWVEPD

NT seq 1971 nt +upstreamnt +downstreamnt
atgcacctcggcgtttgctactaccccgaacactggccgcgcgaacaatgggcgcgcgat
gcgcggcgcatggccgaactgggcctgacgcgcgtgcggatcgccgaattcgcatggagc
cggatggagccggaaccgggccgctacgactgggcgtggctcgacgaagcgatcgacacg
ctcgccagccgccagttgaaggtcatactcggcacgccgaccgcgtcgccgccgaaatgg
cttgtcgatcgccatccggagatcctgccgatcggcgcggacggcgcagtgtggcaattc
ggctcgcgtcgccattacgacatcgcgagccccgtgtatcgcgagcactgcgtgcgcatc
gcggacgcgatggcgcggcgctacggcgcgcatccggcggtgatcgcgtggcagaccgac
aacgagctcggctgtcacaacacgctgccgagctatacgtgtgcggcgctcgaaggcttt
cgcgcgtggctcgccgtgcgctacggcgacatcggcgcgctgaaccgcgcgtggggcaac
gtgttctggagcatggaatatcgcggcttcgacgagatcgagctgccacgccatacgccg
accgacgcgaaccccgcgcacctgctcgacttccggcgctatcagtcggacgaggtcgcg
cggttccatgcggcgcaggtcgatgcgatccgtccgcacgcgccgggccgcgacgtgctg
cacaacttcatgggatttttcaccgagttcgaccactacgcgttcgcgcgcggcggcctc
gatgtcgccgcgtgggacagctacccggtgccgcgcaccgaagtgctgccgctcgacgaa
gccgacaagcagcgctgggcacgcaccggccatcccgacgtgtcggcgttctcgcacgac
ttgtatcgcggtgtcggcaacggccggatgtgggtgatggagcaacaggcggggcccgtc
aactgggggccgtacaacccggtgccgcacgccggcgcggtgcggctgtggacgtgggaa
gcgtttgcgcacggcgcggagctcgtgtcgtatttccgctggcggcagtatccgcatgcg
caggagcagctgcactcggggctcaacgcaccggacgatcagctgtcgccgggcggccgt
gaagtggcgcgcgtcgcacgcgagctggccgcgctggaccccgcgctcgtcgccggcgcg
cgcgagccggcccgcgtcgcgctgctgttcgattacacggccgactggatgatccggatc
cagccgcacggtgccgacttcgactatcagcagcacgcgttcgactggtatcacgcgctg
cgcgaactggggctcgacgtcgatatcgtcgcggccgatgccgacgtgtcgcgctatgca
ctcgtcgtcgtgccgacgctgccagtcgtgccggattgcgtcgtcgagcaggccgtgcgc
ggcaacgcgcactggctgttcgggccacgcaccgggtcgcgcactgccgagttcgcgatc
gtgccgggcctcgcgccgggcaagctgcgcgacgtgctgccggtgcggatcgcgcaagtc
gagtcgctgcggccgtcgctcgcgccgcgcgtcgcgttcgacggtgtcgacggccatgcg
ctgaaatggcgcgatcacatcgacctcgacgcgagcacctccatcgtcgtgctcgctgcc
tgcgacgacggcgtgcccgcgctcgtgcggcacggtcaggtgacgatggcgactgcgtgc
ttcgatcccgcgctgttgcgcgcaatcgtcggccgctgcgcgcgcgatgccggactgccg
gtgcgcgaactgcctgacggcgtgcgcttgtgccggcgcgggcgcgtcgtgttcgcgttc
aactacggcgataccccgtgcacgctgcccgcgccggacggtgcgcgcttcgtgctcggc
ggccccgaactcggcgcggtcgatgtcgccgcatgggtcgagccggactga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BAM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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