KEGG   Bacillus amyloliquefaciens CC178: U471_15920
Entry
U471_15920        CDS       T02893                                 
Name
(GenBank) RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
bamc  Bacillus amyloliquefaciens CC178
Pathway
bamc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bamc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    U471_15920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bamc03021]
    U471_15920
   03400 DNA repair and recombination proteins [BR:bamc03400]
    U471_15920
Enzymes [BR:bamc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     U471_15920
Transcription machinery [BR:bamc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     U471_15920
DNA repair and recombination proteins [BR:bamc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      U471_15920
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AGZ56294
Position
1553015..1553218
AA seq 67 aa
MLDPSIDSLMNKLDSKYTLVTVSARRAREMQIKKDQQIEHTISHKYVGKALEEIDAGLLS
FEREDSE
NT seq 204 nt   +upstreamnt  +downstreamnt
atgttagatccgtcaattgactctttaatgaataaattagattctaaatatacgctggtg
accgtgtctgcaagacgcgcgcgtgaaatgcagatcaaaaaagaccagcagattgaacat
accatttctcacaaatatgtaggcaaagctttagaagaaattgacgcgggcctgctttcg
tttgaaagagaagacagcgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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