KEGG   Bacillus amyloliquefaciens LFB112: U722_14155Help
Entry
U722_14155        CDS       T02965                                 

Definition
5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bamf  Bacillus amyloliquefaciens LFB112
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bamf00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    U722_14155
Enzymes [BR:bamf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     U722_14155
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     U722_14155
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2809610..2810440)
Genome map
AA seq 276 aa AA seqDB search
MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK
FLLFHLDHYVMVSHLRMEGKYGLHQADEPDDKHVHVVFHMTDGTQLRYRDVRKFGTMHLF
APGEERNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVVGLGNIYVDEA
LFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYINSQGEIGMFQLKHY
VYGKKDEPCKTCGTMISKIVVGGRGTHFCARCQKKS
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
gtgccggaattaccagaagttgaaacggtccggcgcactctgaccggtcttgtgaagggg
aaaacgattgaatcggcggatatcagatggccgaatatcatcaaaaaacccgccgagccg
gaggaattcgcgcggcagattgcaggagaaacgatccgatccatcggaagaaggggaaag
tttttgcttttccatttggatcattatgtcatggtgtcccacctgcggatggaggggaaa
tacggtcttcatcaggccgatgagcctgacgataaacatgtgcacgtcgtgtttcacatg
acggacggaacacagctccgctaccgggatgtccggaaattcggaacgatgcatttgttt
gcgccgggagaggaacggaatgcattaccgctttcacagctcgggcccgaacccgatgat
gaagcatttaccgccgcttatttaaaagagcggcttgcaaaaacgaaccgcgcggtgaaa
accgccctgctcgaccaaaaagcggtcgtcggcctcggcaatatttatgtcgatgaagct
ttattccgggcgcgtattcatcctgagacaaaagcgaacagtctgtcggacgggcagata
aaaacgcttcatacagaaattaaagacacccttcaggaagcgattgacgcgggcgggagc
accgtccggtcttatatcaattctcaaggggagatcggaatgtttcagctcaaacattac
gtctacggcaaaaaggatgaaccgtgcaaaacgtgcggcacgatgatttctaaaatcgtg
gtcggcggaaggggcactcatttttgcgcccgctgtcaaaaaaaatcataa

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