KEGG   Bacillus amyloliquefaciens IT-45: KSO_005975Help
Entry
KSO_005975        CDS       T02462                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bami  Bacillus amyloliquefaciens IT-45
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bami00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    KSO_005975
Enzymes [BR:bami01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     KSO_005975
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     KSO_005975
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1147506..1148336
Genome map
AA seq 276 aa AA seqDB search
MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK
FLLFHLDHYVMVSHLRMEGKYGLHQADEPDDKHVHVVFHMTDGTQLRYRDVRKFGTMHLF
APGEERNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVVGLGNIYVDEA
LFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYINSQGEIGMFQLKHY
VYGKKDEPCKTCGTMISKIVVGGRGTHFCARCQKKS
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
gtgccggaattaccagaagttgaaacggtccggcgcactctgaccggtcttgtgaagggg
aaaacgattgaatcggcggatatcagatggccgaatatcatcaaaaaacccgccgagccg
gaggaattcgcgcggcagattgcaggagaaacgatccgatccatcggaagaaggggaaag
tttttgcttttccatttggatcattatgtcatggtgtcccacctgcggatggaggggaaa
tacggtcttcatcaggccgatgagcctgacgataaacatgtgcacgtcgtgtttcacatg
acggacggaacacagctccgctaccgggatgtccggaaattcggaacgatgcatttgttt
gcgccgggagaggaacggaatgcattaccgctttcacagctcgggcccgaacccgatgat
gaagcatttaccgccgcttatttaaaagagcggcttgcaaaaacgaaccgcgcggtgaaa
accgccctgctcgaccaaaaagcggtcgtcggcctcggcaatatttatgtcgatgaagct
ttattccgggcgcgtattcatcctgagacaaaagcgaacagtctgtcggacgggcagata
aaaacgcttcatacagaaattaaagacacccttcaggaagcgattgacgcgggcgggagc
accgtccggtcttatatcaattctcaaggggagatcggaatgtttcagctcaaacattac
gtctacggcaaaaaggatgaaccgtgcaaaacgtgcggcacgatgatttctaaaatcgtg
gtcggcggaaggggcactcatttttgcgcccgctgccaaaaaaaatcataa

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