KEGG   Bacillus velezensis AS43.3: B938_00105
Entry
B938_00105        CDS       T02382                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bamp  Bacillus velezensis AS43.3
Pathway
bamp03030  DNA replication
bamp03430  Mismatch repair
bamp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bamp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B938_00105
   03430 Mismatch repair
    B938_00105
   03440 Homologous recombination
    B938_00105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bamp03032]
    B938_00105
   03400 DNA repair and recombination proteins [BR:bamp03400]
    B938_00105
Enzymes [BR:bamp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B938_00105
DNA replication proteins [BR:bamp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B938_00105
DNA repair and recombination proteins [BR:bamp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B938_00105
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_30 TIP49 AAA_assoc_2 AAA_16 AAA_5 AAA_22 AAA_19 DnaX_C Rad17 PIF1 Mg_chelatase DNA_pol3_delta_C AAA_7 AAA_28 AAA_24 AAA_14 DUF815 FlgN TsaE HMMR_C
Other DBs
NCBI-ProteinID: AFZ89066
Position
28010..29701
AA seq 563 aa
MGYQALYRVFRPQQFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK
AVNCEHAPVEEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY
KVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITS
KAIVGRMKTIVDAEQLKVEEGALDIIASAADGGMRDALSLLDQAVSFSGEELSVDDALLI
TGAVSQHYIGKLASALHRKQVSEALETLNELLQQGKDAAKLIEDMIFYFRDMLLYQAAPG
LEGVLEKVKVDETFRNLSGDIPAPALYEMIDILNKSHQEMKWTNHPRIFFEVAVVKICQT
AQQSAGDIPEVGMLMNKIQQLEQEVERLKTSGVKVQMESAPKEAPRPQKGGKSHYKAPVG
RIHEILKEATRPELEQLKSSWGKLLAHLKQQNKVSHAALLNDSEPVAAAQKAFVLKFKYE
IHCKMVAEDNNGVRTNLEQILESMLGKRMDLIGVPEAQWGKIREEFLNDHQQESEGSNEP
AEEDPLIAEAKKLVGADLIEIKD
NT seq 1692 nt   +upstreamnt  +downstreamnt
gtgggttaccaagctttatatcgagtatttaggcctcagcagtttgaagatgtggtcgga
caggaacacattacgaaaacgctgcaaaatgcccttttgcaaaagaaattttctcatgca
tatctgttttctggaccgcggggaacgggaaaaaccagtgcagctaaaatatttgcgaaa
gcagtcaactgtgagcacgcccccgtagaagaaccgtgcaatgaatgtgcggcgtgcaag
gggatcacaaacggctctatatcagatgtgattgaaatagatgcggcgtcgaataacggc
gtagacgaaatccgcgacatccgtgacaaagtaaaattcgccccgtcggccgtcacctac
aaagtatatattatagatgaggtgcatatgctctctatcggcgcattcaatgcgcttctg
aaaacgctggaagaaccgccggcacattgcattttcatattagctacaactgagcctcat
aagattcctttaaccattatctccagatgtcagcgttttgacttcaaacggattacatcc
aaagcaattgtcggacgaatgaagacaatcgtcgatgcagagcagctgaaggtggaagaa
ggagcccttgatatcatagcgagtgctgcggacggaggaatgagggacgcgctgagcctg
ctcgatcaagccgtatcattcagcggcgaggagctgtcggtggatgatgcattgctcatt
accggagccgtttctcagcactatattggaaaactggcatctgctcttcaccgcaaacag
gtttccgaggcattggaaacactgaatgaattgctccagcaagggaaagatgcggccaaa
ctgattgaagatatgattttctatttcagggatatgctcttgtaccaggccgctcccggt
ttagaaggagtcctggagaaggtgaaggtcgatgaaacgtttcggaatctgagcggtgac
ataccggcccccgctttatatgagatgattgatatcctgaataaaagccatcaggaaatg
aagtggacgaaccacccaagaatcttttttgaagtggctgtcgtgaaaatatgccagacg
gcacagcaatccgccggagacatccctgaggtcggcatgctgatgaataagattcagcag
cttgagcaggaagtagaaaggctgaaaacctccggtgtgaaggttcagatggaaagcgct
ccgaaagaagctccgcgtcctcaaaaaggcggaaaaagccattacaaagctccggtcgga
agaattcatgagatattgaaggaagccaccagacctgaacttgaacagcttaaaagcagc
tggggcaagctgctggcacacctgaaacagcagaataaggtgtctcatgcggctctgttg
aatgacagtgaaccggtggctgctgctcaaaaggcatttgtgcttaaatttaaatacgaa
atccattgtaaaatggttgcagaagacaataacggagtccgtacgaatcttgaacagatt
ctcgaatcaatgctcgggaaaagaatggatttgattggcgttccggaagcacaatggggt
aaaataagagaagaatttttaaatgatcaccagcaggaaagtgaaggatcaaacgaaccg
gctgaagaagatccgctgattgcagaggcgaaaaaacttgtcggagcggatttaatcgaa
ataaaagactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (36)   

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