KEGG   Bacillus amyloliquefaciens subsp. plantarum AS43.3: B938_13505Help
Entry
B938_13505        CDS       T02382                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bamp  Bacillus amyloliquefaciens subsp. plantarum AS43.3
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bamp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    B938_13505
Enzymes [BR:bamp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     B938_13505
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     B938_13505
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2788724..2789560)
Genome map
AA seq 278 aa AA seqDB search
MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK
FLLFHLDHYVMVSHLRMEGKYGLHQADEPDDKHVHVVFHMTDGTQLRYRDVRKFGTMHLF
APGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVVGLGNIYVDEA
LFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYINSQGEIGMFQLKHY
VYGKKDEPCKTCGTMISKIVVGGRGTHFCARCQKKIIN
NT seq 837 nt NT seq  +upstreamnt  +downstreamnt
gtgccggaattaccagaagttgaaacggtccggcgcactctgaccggtcttgtgaagggg
aaaacgattgaatcggcggatatcagatggccgaatatcatcaaaaaacccgccgagccg
gaggaattcgcgcggcagattgcaggagaaacaatccgatccatcggaagaagggggaag
tttttgcttttccatctggatcattatgtcatggtgtcccacctgcggatggaggggaaa
tacggtcttcatcaggccgatgagcctgacgataaacatgtgcacgtcgtgtttcacatg
acggacggaacacagctccgctaccgggatgtccggaaattcggcacgatgcatttgttt
gcgccgggagaggaacagaatgcattaccgctttcacagctcgggcccgaacccgatgat
gaagcatttaccgctgcttatttaaaagagcggcttgcaaaaacgaaccgcgcagtgaaa
acagccctgctcgaccaaaaagcggtcgtcggcctcggcaatatttatgtcgatgaagct
ttattccgggcgcgtattcatcctgagacaaaagcgaacagtctgtcagacgggcagata
aaaacgcttcatacagaaattaaagacacccttcaggaagcgattgacgcgggcgggagc
accgtccggtcttatatcaattctcaaggggagatcggaatgtttcagctcaaacattac
gtatacggcaaaaaggatgaaccgtgcaaaacgtgcggcacgatgatttctaaaatcgtg
gtcggcggaaggggtacgcatttttgcgcccgctgccaaaaaaaaatcataaactga

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