KEGG   Bifidobacterium animalis subsp. lactis Bl12: Bl12_0384
Entry
Bl12_0384         CDS       T02712                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
bani  Bifidobacterium animalis subsp. lactis Bl12
Brite
KEGG Orthology (KO) [BR:bani00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bani03016]
    Bl12_0384
Enzymes [BR:bani01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Bl12_0384
Transfer RNA biogenesis [BR:bani03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Bl12_0384
 Prokaryotic type
    Bl12_0384
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AGO51902
Position
483983..484879
AA seq 298 aa
MTRLRIDLAYNGAAFHGWAAQPGCRTVQGTVEEALRRITRMPDAGSLRLTVAGRTDAGVH
ATHQVCHVDVPDQTLGQCVGHMNLTPVQALQTRLSRMMPDDIAIHGISVAPAGFDARFSA
LERTYVYRIADARVPWDPRLKDFAWRTDRELDIAQMNAAAALTLGLHDFGSFAIANPGGT
TIREVKTAYWQRVPTRPLLGPGMGERYHTPAVESGLLCFTIVADAFARNMVRSLVGACVQ
VGMGKRDVDWFAGKMRVPLREGSTGPIAPQGLTLEHIAYPADDELAARAERIRAKRTL
NT seq 897 nt   +upstreamnt  +downstreamnt
gtgacacgtttacgaatcgacttggcctataacggtgccgcgttccacggatgggcggcg
caaccaggctgccggacggtgcagggaaccgtcgaggaggccttgagaagaatcacgcgc
atgccggatgccgggtccttgcggctcaccgtggccgggcgcaccgacgccggcgtgcat
gccacgcatcaggtgtgccacgtcgatgttcccgaccagacactcggacaatgcgtcggc
catatgaatttgacgccggtgcaggccctgcagaccaggttgtcgcgcatgatgcccgat
gatatcgccatccatgggatttccgtggcgcctgccggtttcgacgcgcggttctccgca
ctcgaacgcacctatgtgtaccggattgccgacgcgcgcgtgccctgggacccgcggctc
aaggatttcgcatggcgcaccgaccgcgaactcgacatcgcgcagatgaatgccgctgcc
gcacttacactggggctgcatgacttcggttcgttcgccattgcgaatccggggggcacg
actattcgcgaggtgaagaccgcctactggcaacgcgtgccgacgcggccgttgctcgga
cccggcatgggggagcgctaccatacgcctgccgtggagtccgggctgctgtgcttcaca
atcgtcgccgacgccttcgcccgcaacatggttcgctcgcttgtgggtgcctgcgtgcag
gtgggcatgggcaaacgggatgtggattggttcgccggcaagatgcgtgtgccgttgcgc
gagggatccactgggccgatcgcgccccaggggctcacgctcgaacacatcgcctatccg
gccgacgacgagctcgccgcgcgtgcggaacgaatccgtgccaagcgcacgctctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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