KEGG   Bifidobacterium animalis subsp. lactis Bl12: Bl12_1171
Entry
Bl12_1171         CDS       T02712                                 
Name
(GenBank) DNA repair protein RecO
  KO
K03584  DNA repair protein RecO (recombination protein O)
Organism
bani  Bifidobacterium animalis subsp. lactis Bl12
Pathway
bani03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bani00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Bl12_1171
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bani03400]
    Bl12_1171
DNA repair and recombination proteins [BR:bani03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Bl12_1171
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Bl12_1171
SSDB
Motif
Pfam: RecO_N RecO_C RecO_N_2
Other DBs
NCBI-ProteinID: AGO52689
Position
complement(1439953..1440672)
AA seq 239 aa
MALYRDEAVVLRTAKLGEADRIITLLTRDHGKVRAVAKGVRRTKSRFGARLEPFMRVDLL
LGEGRTFDSVRQAESISAYAGGITGDYATYTAASAMCETAADLLPAEHEPAAAQYRLLIA
ALGALSRHLHDPQAIALSYILRAMSLAGWTIRLDSCVVCGSQDVEFFSASAGGAMCPNDH
TPDAVRVPVHVFDQLRALEQGDWPQLDMLQTPDPRCENIVREWAQYYLERPIRSLRLLD
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcattgtacagggacgaggccgtggtgctgcgcaccgccaagctcggcgaggccgat
cgcatcatcacattgcttacccgcgaccacggcaaggtgcgtgcggtggcgaaaggcgtg
cgtcgcacgaaatcgagattcggggcgcgcttggagccgttcatgcgcgtcgatctgctg
ctgggtgaggggcgcaccttcgacagcgtgcggcaggcggaatccataagtgcgtatgcc
ggcggcatcacgggagattatgccacctacactgcggccagtgcgatgtgcgagaccgcg
gccgatctgctccccgccgagcacgagcccgcggcagcgcaataccgcctgctcatcgcc
gcattgggcgcattgagcaggcatctgcatgaccctcaggccattgcactgtcgtatatt
ctgcgcgcaatgtcattggccggctggaccattcgcctcgactcgtgcgtggtgtgcggc
agtcaggacgtggagttcttctcggcttcggcaggcggcgcaatgtgcccgaatgaccac
acgccagatgccgtgcgcgtgccggtgcatgtgttcgaccagttgcgggcgctcgaacag
ggggattggccgcagctcgacatgctgcagacgcccgacccgcggtgcgagaacatcgtt
cgcgaatgggcgcaatactaccttgagcggccgattcgttctctgcgcttgctagattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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