KEGG   Bifidobacterium animalis RH: EN10_06225
Entry
EN10_06225        CDS       T03481                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
banm  Bifidobacterium animalis RH
Pathway
banm03030  DNA replication
banm03430  Mismatch repair
banm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:banm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EN10_06225
   03430 Mismatch repair
    EN10_06225
   03440 Homologous recombination
    EN10_06225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:banm03032]
    EN10_06225
   03400 DNA repair and recombination proteins [BR:banm03400]
    EN10_06225
Enzymes [BR:banm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EN10_06225
DNA replication proteins [BR:banm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EN10_06225
DNA repair and recombination proteins [BR:banm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EN10_06225
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2 FAM25 DUF5487
Other DBs
NCBI-ProteinID: AIA33224
Position
complement(1415580..1419146)
AA seq 1188 aa
MTNSADFVQLHNHTHYSLLDGASKIPDLVKYTKELGMGAVGITDHGNMHGAYEMYTEAVK
QDVKPIIGIEAYVTPETARQDKSRVHWGTEAQRRDDVSGGGLITHLTLWAEDDEGLRNLI
RASSVANLEGRVMRYPRMDKEVLSTYSKGVICGSGCPSGIVQTRLRLGQFDEALRAAGEL
QDIYGKDNFFIELMDHNLEIERKVTKDLLEIAKKLGAPLLATNDSHYVHEEDAGAQDAML
CINSGSHLDDPDRFKFDGEGYYMRSAQQMRELFRDLPEACDNTIEVAERCNVMFDDHEDG
AFMPKFPCPEGWDETSLFLKKVEEGLERRYEGNVPAHVLAQADYECGVICQMQFPGYFLV
VADYIQWAKDHGIMVGPGRGSAAGSMVAYAMGITELDPLEHGLIFERFLNPERVSLPDID
VDFDPEGRLKVIEYCGDKYGHDKVAQCVIYGTIKTKQALKDSARIMGYEFSMGELVTKAL
PPAATGGKDVPLHDIFDPGAKRYAEAREYRELYESNPDAKRITDEAMGIEGLIRQTGVHA
CATIMGSEPITDTSPLLERTDGTVTTTFEYHTCETLGLVKMDFLGLSNLTVIGDTLRNIE
ANGKEPIDHTKIPLDDKETYELLSRGDTLGVFQLDSDGMRALLKQLKPDNFNDISALIAL
YRPGPMSMDSHTNYAKRKNGLQKIEPIHPELAEPLKEVLDETYGLIIYQEQVQSAARILA
GYSLGKADVLRRAMGKKKPEVLAKEQVPFFEGMKEHGYSREAAQAVWDVLVPFSGYAFNK
AHSAAYGLISYWTAYLKTHYPAEFMAALLQGASTNKDKTALYLGEARRMGIKVLSPDVNE
SVYAYSAVGDVVRFGLGAIRNVGEKAVADIIAERQGSHGRYVNFMDFIRRVPLTALNRRL
VESLIKAGAFDSIDPNRRALYQIHEAAIDSVTDLKRKQATGQFDLFADLDAGADDGEAEA
LGDVSISVPDVEEWDKKTKLNFEREMLGLYVSDHPLSGMQSVLASLRDMSIAQLIDRAPT
MPERSQVMVAGLITNVDSRVSKKGNRWAIVTIEDMESSIQCLLFGKVYEAHAAELAIDTI
VQVRGMVEARDETISLRATDLMVPVIEAGEDRPVFVQLPAHALDMQRLEQFSQILSNHPG
ACEVRLAIVDDNGGVTLMTLGDRFRVRRETGLFADIKVLFGANALPMI
NT seq 3567 nt   +upstreamnt  +downstreamnt
atgaccaattccgctgatttcgtgcagttgcacaaccatacgcattattcgttgcttgat
ggtgcatcgaagattcccgatctggtgaagtacacgaaggaattgggaatgggtgccgtg
ggcatcacggaccatggcaacatgcatggcgcgtatgagatgtacaccgaggcggtgaag
caggatgtcaagccgatcatcggcatcgaggcttatgtgacgccggagacggcgaggcaa
gacaaatcgcgcgtgcattggggcacggaggcgcaacggcgtgatgatgtgtccggtgga
ggcctgatcacgcatttgacgctgtgggccgaggacgacgaaggattgaggaacctgatc
agggcctcttcggtggcgaatctcgaaggacgtgtgatgcgctatccgcgtatggacaag
gaggtgctctccacctacagcaaaggcgtgatctgcggttcgggatgcccgtcaggcatt
gtgcagacccgtttgcgcctcggtcagttcgatgaggccttgcgtgcggcgggtgagttg
caggacatctatggcaaagacaatttcttcattgagctgatggaccataatctcgagatc
gagcgcaaggtgacgaaggacctgcttgagatcgcgaagaagctcggtgcgccgctgctg
gccacgaacgattcgcattacgtccacgaggaggatgctggcgcgcaggacgcgatgctg
tgcatcaattcaggctcgcacctggatgatccggaccggttcaagttcgatggagaaggg
tattacatgcgttccgcgcagcagatgcgcgagctgttccgcgacctgcccgaggcgtgc
gacaatacgatcgaggtggcggaacgttgcaatgtgatgttcgacgaccacgaggacggc
gcgttcatgcccaagttcccatgcccggagggttgggacgagacctcgctgttcctgaag
aaagtggaggagggcctcgaacggcggtacgagggcaatgtgccggcgcatgtgctggcg
caggcggattacgagtgcggtgtgatctgccagatgcaattcccaggctacttcctggtg
gtggctgattacatccaatgggccaaagaccatgggatcatggtggggccgggccgtggc
tccgcggcaggatcgatggtcgcctatgcaatgggcatcaccgagctcgatcccctggag
catggtctgatcttcgaacggttcctgaacccggagcgcgtgtcgctgccggatatcgac
gtggacttcgacccggagggccgtctgaaggtgatcgagtactgcggcgacaaatacggg
cacgacaaggtggcgcaatgcgtgatctacggcacgatcaagacgaagcaggcgctcaag
gattcagcgcgcatcatgggctacgagttctcgatgggcgagttggttaccaaggcgttg
ccgccggcggcaacgggtggcaaggacgtgccgctgcacgacattttcgatccaggtgcg
aaacgctatgcggaggcgcgtgaataccgcgaattgtatgagtcgaatcccgatgccaag
cgaatcaccgacgaggcgatgggcatcgagggcctgattcgccagacgggtgtgcacgca
tgcgccacgatcatgggctcggagccgatcactgacacgtcgccgctgctggagcgcacg
gatggcacggtgacgacgacattcgaataccacacgtgtgagacattgggtctggtgaag
atggacttcctgggtctgtccaacttgacggtgatcggtgacacgctcaggaacatcgag
gccaacggcaaggaaccgattgaccatacgaagattccgctcgacgacaaggagacatac
gaactgctgtcgcgcggcgacacgctgggtgtgttccagctcgattccgacggcatgcgt
gcgctgctcaagcagctgaagccagataacttcaacgacatctcggcattgatcgccctc
taccgtccgggcccgatgagcatggactcgcatacgaactacgcgaaacgcaagaacggg
ttgcagaagatcgagccgatccatccggagcttgccgagccgctcaaggaggtgctcgac
gagacctacggcctgatcatctaccaagaacaggtgcaatccgccgcccgtattctggcc
ggctattcgctgggcaaggccgacgtgctcaggcgcgcgatgggcaagaagaagcccgag
gtgctggccaaggaacaggtgccgttcttcgaaggcatgaaggagcacggctattcccgc
gaggcggcgcaggcggtgtgggacgtgctcgtgccgttctcgggctatgcgttcaacaag
gcgcattccgccgcctacgggctcatctcgtattggaccgcctatttgaagacgcactat
ccggccgagttcatggccgccctgttgcaaggcgcctccacgaacaaggacaagaccgcc
ctgtacctaggcgaggcgcgccgcatgggcatcaaggtactctcgccggatgtcaacgaa
tccgtgtacgcctactccgccgtcggtgatgtggtgcgtttcggactcggtgccatcagg
aacgtgggtgaaaaggcagtcgccgacatcattgccgagcgtcagggcagccacggcagg
tacgtcaacttcatggacttcattcgccgtgtgcctctgaccgcactcaataggcggttg
gtcgaatcgttgatcaaggcgggtgccttcgactcgatcgaccccaaccggcgtgccctc
taccagattcacgaggccgcgatcgactcggtcaccgacctcaaacgcaagcaggccact
gggcagttcgacctcttcgccgacctcgacgccggtgccgacgatggcgaggccgaagcg
cttggcgacgtgtcgatcagcgtacctgacgtggaggagtgggacaagaagaccaagctc
aacttcgaacgcgaaatgctgggcctgtatgtgtccgaccacccgctttcaggcatgcag
tccgtgctcgccagcctgcgtgacatgtccatcgcgcaactgatcgaccgtgctcccacg
atgcccgagcgcagtcaggtcatggtcgccgggctcatcaccaacgtcgactcacgcgtc
tccaagaaaggcaaccgatgggcgatcgtgacgattgaagacatggagagctccatccaa
tgcctgctgttcggcaaggtgtacgaggcgcacgcggcggaactcgccatcgacacgatc
gtgcaggtgcgtggcatggtcgaggcacgtgacgagacgatttcgttgcgcgccaccgac
ctcatggtgcccgtcatcgaagccggtgaggaccgtcctgttttcgtccagctgcctgcg
cacgccctcgatatgcaacggctcgaacagttctcgcagatcctctccaatcatcccggt
gcctgcgaggtcaggcttgccatcgtcgacgacaatggcggcgtgaccctcatgaccctc
ggcgatcgcttccgtgtgcgtcgtgagaccggcctgttcgccgacatcaaggttcttttt
ggcgccaacgcactgcctatgatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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