KEGG   Bacillus anthracis A16R: A16R_03470
Entry
A16R_03470        CDS       T02999                                 
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
banr  Bacillus anthracis A16R
Pathway
banr03030  DNA replication
banr03410  Base excision repair
banr03420  Nucleotide excision repair
banr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:banr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A16R_03470 (ligA)
   03410 Base excision repair
    A16R_03470 (ligA)
   03420 Nucleotide excision repair
    A16R_03470 (ligA)
   03430 Mismatch repair
    A16R_03470 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:banr03032]
    A16R_03470 (ligA)
   03400 DNA repair and recombination proteins [BR:banr03400]
    A16R_03470 (ligA)
Enzymes [BR:banr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     A16R_03470 (ligA)
DNA replication proteins [BR:banr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A16R_03470 (ligA)
DNA repair and recombination proteins [BR:banr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     A16R_03470 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A16R_03470 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     A16R_03470 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      A16R_03470 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD RNA_pol_A_CTD HHH PTCB-BRCT HHH_3 BRCT_2 5_3_exonuc RNA_ligase
Other DBs
NCBI-ProteinID: AHE81730
Position
313427..315436
AA seq 669 aa
MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP
SIRVGGTVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDDANVRYICELKIDGL
AVSLHYEKGRFIQGATRGDGVTGEDITQNLKTIKAIPLRLNEEVTLEARGEAYMPKRSFV
KLNEEKEQNGEDVFANPRNAAAGSIRQLDPKIAAKRNLSMFVYGLANVEEKTIPSHSESL
DYLGELGFKTNPNRRTCETIEEVIAYVEEWQEKRPHLDYEIDGIVIKVDDVALQESLGTT
AKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNEDL
IREKDIRIGDYVVVKKAGDIIPEVVNVIFDKRTGGEEEYHMPTHCPACESELVRLEEEVA
LRCINPTCPAQIREGLIHFVSRNAMNIDGLGERVITQLFDADYIRTFADLYSLTKEQLLQ
LERFGEKSATNLVQAIENSKENSLERLLFGLGIRHVGAKAARTFAEHFETMDALVKATEE
ELKAINEIGEKMAQSVVAYFDNEDVLELLQQFKEYGVNMTYKGIKIADLQNVESYFAGKT
VVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVVAGEAAGSKLAQAEKHNVEVWNE
ERFLQELNK
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtcaaaagagatagcaaaaaaacgtatagaagaactacgtgatttgttaaatacattt
aactatcaatatcacgtattagacaatccttctgtttctgatgcggagtatgaccgtaat
atgcaggagcttataaaattagaagcagagaatccagagtttatgagtgaagactctccc
tctattcgagttgggggaacggttcttgatatatttgaaaaagtaacacataagtcaccg
atgttaagtttaggaaatgcatttaacgaaggagatttacgtgattttgacagacgagta
cgtcaaggaattgatgatgcgaatgtaagatatatatgcgaattaaaaattgacggactt
gctgtttcacttcattatgaaaaaggacgcttcattcaaggggcaacacgtggtgatggt
gtaacaggtgaagatattacccaaaatttaaaaacgattaaagcaatcccgcttcgttta
aatgaagaagtaacgttagaagcacgaggcgaagcttatatgccgaagcgttcattcgtt
aagttaaatgaagaaaaagagcaaaatggtgaagatgtatttgcgaatccgcgtaatgcg
gcagcaggttcaatccgccaacttgatccgaaaattgcagcgaagcgtaacttatctatg
tttgtatacggtcttgcgaatgtagaagaaaaaacaatcccatcacatagtgaatcgctt
gattacttaggtgaacttggattcaaaacaaatccaaatcgtcgtacatgtgaaacaatt
gaagaagttatagcttatgtagaagaatggcaagaaaaacgtccgcatcttgattatgag
attgatgggatcgttataaaagtagatgatgttgctcttcaagaaagtctaggaactaca
gcaaagagtccaagatgggcgattgcttataaattcccagcggaagaagttgtaacaaga
ttaacgggcattgaattaagtgttggtcgtacaggagttgtaacaccgactgcagagcta
gagccagtgcgagtggctggtacgatcgttcgtcgtgcttctttacataacgaagattta
attcgtgaaaaagatattcgaattggtgactacgttgttgtgaagaaagctggagatatt
attccagaagttgtaaatgttatttttgataagcgtactggtggggaagaagaatatcat
atgccaacgcattgcccagcatgtgagagtgaactagttcgtttagaagaagaggtagca
cttcgttgtataaatccaacttgtcctgctcaaattcgagaagggttaatccatttcgtt
tcaagaaatgcaatgaatattgatggtcttggagaacgtgttattacacaactctttgat
gctgattatattcgtacatttgcggatttatattcgttgacgaaagagcaattattacag
ttagaacgattcggagaaaaatcagcaacgaatttagtacaagcaattgagaattctaaa
gaaaactcattagagcgattattattcggtcttggtattcgccatgtcggagcgaaagca
gcacgtacatttgcagagcatttcgaaacgatggatgcacttgtgaaagcgacggaagaa
gaattaaaagcaattaacgagattggtgaaaaaatggctcaatccgtcgtggcgtatttt
gataatgaagacgtattagagctattacaacaatttaaagagtatggcgtgaatatgaca
tacaaaggtataaaaattgctgatttacaaaatgttgagtcgtactttgcaggaaaaact
gtcgttttaactgggaaattagaagttatgggacgtagtgaagcgaagaagaagattgag
gcattaggtggaaaagtaacaggaagtgttagtaaaagtacggatttagttgtcgcaggt
gaagcggcaggttcgaaattagcacaagcggagaaacataatgttgaggtttggaatgaa
gagaggttcttacaagagctaaataagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system