KEGG   Buchnera aphidicola 5A (Acyrthosiphon pisum): BUAP5A_588
Entry
BUAP5A_588        CDS       T00820                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bap  Buchnera aphidicola 5A (Acyrthosiphon pisum)
Pathway
bap03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bap00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BUAP5A_588 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bap03021]
    BUAP5A_588 (rho)
   03019 Messenger RNA biogenesis [BR:bap03019]
    BUAP5A_588 (rho)
Transcription machinery [BR:bap03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BUAP5A_588 (rho)
Messenger RNA biogenesis [BR:bap03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BUAP5A_588 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_25 AAA_22 AAA FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: ACL30930
UniProt: A0A7U4DIH1
Position
complement(627635..628894)
AA seq 419 aa
MNLTALKNMPVSELITLGEKMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTILLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELPLSRKIAEKRVFPAIDY
NRSGTRKEELLTLPDELQKMWILRKIIHPMSEIDAMEFLLNKLAMTKTNDEFFDMMKRS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatcttaccgcacttaaaaatatgccagtttctgaattaattactcttggtgaaaaa
atggggttggaaaatttagcgcgtatgcgtaaacaagatattatttttgccatccttaaa
caacatgcaaaaagtggagaagatatatttggagacggtgttttagaaatactacaagat
ggatttggctttctacgttctgcagatagctcttatttagctggtcctgatgatatttat
gtttcaccgagtcagattcgtagatttaatctacgtacaggtgatactattgctggaaaa
ataagaccccctaaagaaggcgaaagatattttgctctacttaaagtaaacgaagtaaat
tatgataaacctgaaaatgcaagaagcaaaatattatttgaaaatttaacaccattacat
gccaattctagactacgaatggaacgtggaaacggatcaaccgaagatttaaccgcaaga
gtattagatttagcatcaccaatcggacgtggacaaagaggattaattgtagctccgcca
aaggcaggaaaaacaatattactgcaaaatatagcacaaagtattgcttataatcatcca
gattgcgttttaatggtattattgattgatgaaagaccagaagaagttactgaaatgcaa
agattagttaaaggagaagtggttgcctctacttttgacgaacctgcatcaagacatgtt
caagtggctgaaatggttattgaaaaagcaaaaagattagtagaacataaaaaagatgta
ataattttacttgattctattactcgtttagcaagagcctataatacagtagtacctgca
tcaggaaaagtattaactggaggagtagatgcaaatgctttacatagacccaagcgattt
tttggtgctgcgcgtaatgtggaagaaggaggaagtttgacaatcattgcaactgcatta
gttgatactggttctaaaatggatgaggtaatatacgaagagtttaaaggaacaggcaat
atggagcttccattatctaggaaaattgcagaaaagcgtgtttttccagctattgattat
aatcgatctggtactagaaaagaagaattattaactttgccagatgaactacaaaaaatg
tggattttaagaaaaattattcatcctatgagtgaaatagatgcaatggaatttttgctt
aataaacttgcaatgaccaaaacaaatgatgaattttttgatatgatgaaacgctcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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