KEGG T03022: BUMPUSDA

Buchnera aphidicola USDA (Myzus persicae): BUMPUSDA_CDS00575

Entry

BUMPUSDA_CDS00575 CDS       T03022

Symbol

gyrb

Name

(GenBank) Gyrb

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

bapu Buchnera aphidicola USDA (Myzus persicae)

Brite

KEGG Orthology (KO) [BR:bapu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bapu03032]
    BUMPUSDA_CDS00575 (gyrb)
   03400 DNA repair and recombination proteins [BR:bapu03400]
    BUMPUSDA_CDS00575 (gyrb)
Enzymes [BR:bapu01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BUMPUSDA_CDS00575 (gyrb)
DNA replication proteins [BR:bapu03032]
Prokaryotic type
  DNA Topoisomerases
   BUMPUSDA_CDS00575 (gyrb)
DNA repair and recombination proteins [BR:bapu03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BUMPUSDA_CDS00575 (gyrb)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C GyrB_insert Toprim HATPase_c GyrB_hook HATPase_c_3

Other DBs

NCBI-ProteinID:

AHG60348

UniProt:

W0P5M2

Position

complement(8864..11275)

AA seq 803 aa
MTNIYDSSNIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALSGYCKEII
IIIHSDNSVSVKDNGRGIPTDIHPEENISAAEVIMTVLHAGGKFDNSSYKISGGLHGVGI
SVVNALSEKLELIIYKNKKKYQQIYRNGKPDHPLSIIGKSDTTGTYIRFWPSYKTFTNNI
QFQYEILSKRLRELSFLNANISIHLKDNRTNIKNHYQHKGGIKAFIKFLNINQILIHSRI
FYFRSMRNQIELEVAMQWTNSHKENILCFTNNIPQKDGGTHLAGFRSGLTRTLNLHIERE
GYNKKNKTTIIGEDAREGLTAIISIKIPDPKFSSQTKDKLVSSEARSIIESLINENLIEY
LLENPTDAKSIIQKVITAAKTREAARRAREINKKKGILDLGALPGKLSDCQENDPKLSEI
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKSKFEKMLLSQELSSLITALGCGIGK
NEYNIDKLRYNYIIIMTDADVDGAHIRTLLLTFFYRQLPELIEKGHIYIAQPPLYKVKKG
KKEEYIKNDQDMNKYQIKNALKDLMLKSNNNPDINKNIQKFKKMISEYNSILIIMEKNKH
YFPKVILNELIYHPHLDNLNNINTVEIWINTLSDKLNKKDYNNNSYSTEIKKNIHQNIFE
PTIKISRYSYHVKYEFKADFFKSKEYFLITNLGKIFQNFFIHEVFVEKTGSSYKIDNIKN
TLEWLIQQSKRGLFIQRYKGLGEMNPEQLWNTTMNPETRNMLQVSIQDAISANNLFNTLM
GDAVEPRRKFIEKNALKAENIDI

NT seq 2412 nt +upstreamnt +downstreamnt
atgacaaatatatatgattcttctaatataaaaattttaagagggctcgatgcggttcgt
aaacgaccaggtatgtatattggagatacagatgatggaagtggattgcatcacatggtt
tttgaagttgtagataattctattgatgaagcattatcaggttattgtaaagaaattata
attattattcattcagataattctgtatctgttaaagataatggaagaggtattcctact
gatattcatcctgaagaaaatatttcagctgcagaagtgattatgacagtactacatgca
ggaggtaaatttgataattcttcatataaaatatcaggtggattacatggtgtaggaata
tcagttgtaaatgctctgtcagaaaaattagaacttataatttataaaaataaaaaaaaa
tatcaacaaatatatagaaatggaaaaccagatcaccctctttctattattgggaaaagt
gatactacaggtacttatataagattttggcctagttataaaacatttactaataacatc
caatttcaatatgaaattttgtctaaaagattacgcgaactatcttttctaaatgcaaat
atttcaattcatctaaaagataacagaactaatataaaaaaccattatcaacataaagga
ggcattaaagcttttattaaattcctaaatataaatcaaatactaattcattcacgcatt
ttttattttcgatctatgagaaatcaaatagaattagaagttgctatgcaatggactaat
tcacataaagaaaatatattatgtttcactaataatataccgcaaaaagatggaggaaca
catttagcaggttttcgttctggtctaactcggactttaaacctccatatagaaagagaa
ggatataataaaaaaaataaaacaactattataggtgaagatgcacgtgaaggattaaca
gctattatatcaattaaaatacctgatccaaagttctcttctcaaactaaagataagtta
gtatcttctgaagcaagatcaattatagaatcattaattaacgaaaatcttattgaatat
cttttagaaaatcccactgatgccaaatctattattcaaaaagtcatcactgctgcaaaa
acaagagaagctgcacgacgtgctagagaaataaacaaaaaaaaaggaatattagattta
ggagctttacctggaaaattatctgattgtcaagaaaatgatcctaaactttcagaaatt
tatttagttgaaggtgattcagctggtggatccgcaaaacaaggaagaaatcgaaaaaat
caagctatacttcctttaaaaggaaaaatattaaatgtcgaaaaatcaaaatttgaaaaa
atgcttttatctcaagaattatcttctctaataactgcattaggctgtggaattggtaaa
aacgaatataacatagataaattaagatataactatattattatcatgactgatgcggat
gtagacggtgcacatattcgaacattacttttaacttttttttatcgtcaattaccagaa
ttaattgaaaaaggacatatttatattgcacaacctccattatacaaagtaaaaaaagga
aaaaaagaagaatatattaaaaatgatcaagacatgaataaatatcaaattaaaaatgct
ctaaaagatttaatgttaaaaagtaataataatcctgatattaataaaaacatacaaaaa
tttaaaaaaatgatatctgaatataattcaattctaattatcatggaaaaaaacaaacat
tactttccaaaagtaattttaaatgaacttatttatcatcctcatttagataatttaaat
aatattaatacagtagaaatttggataaatactttatcagataaattgaataaaaaagat
tataataataattcttattctacagaaataaaaaagaacatacatcaaaatatatttgaa
cctactataaaaatctctagatactcatatcatgttaaatatgaatttaaagcagatttt
tttaaaagtaaagaatatttcttgattactaatttaggtaaaatatttcaaaattttttt
atacatgaagtttttgtagaaaaaacaggatctagctataaaatagataatataaaaaac
actttagaatggttaatccaacaatctaaacgtggtttatttatacaacgttataaagga
ttaggagaaatgaatccagaacaattatggaatacaaccatgaatcctgaaactagaaat
atgttacaagttagtattcaagatgcaatctctgcgaataatttatttaataccttaatg
ggagatgcagttgaacctagacgaaaatttatagaaaaaaatgctttaaaagcagaaaat
attgatatatga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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