KEGG T01692: BACAU

Bacillus amyloliquefaciens subsp. plantarum CAU B946: BACAU_1295

Entry

BACAU_1295 CDS T01692

Gene name

ligD

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

baq Bacillus amyloliquefaciens subsp. plantarum CAU B946

Pathway

baq03410	Base excision repair
baq03420	Nucleotide excision repair
baq03430	Mismatch repair
baq03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:baq03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:baq03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:baq03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:baq03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M mRNA_cap_enzyme

Other DBs

NCBI-GI:

375361985

NCBI-GeneID:

11698460

UniProt:

H2AHS9

Position

complement(1337275..1339098)

AA seq 607 aa
MQPILTSVPPEGSEWRYEVKYDGFRCLLRIDENGVTLTSRNGQTLTNQFPEITAFAARCF
QHMKDRFPITLDGELVYLINPYRADFEHLQIRGRLKRTEAIKSTAERRPCRFLAFDLLVL
EGAGTVSLPYVKRKRALSNLLKEANLPVCPHHLAEEAIQYIPEHTDFDALWDKVVRYDGE
GIVAKRASSGWAENKRSPDWQKYKHMKTAHVLLTGFNPKNGYVTASVLKDGIVVPIASVS
HGMQAEEKNAVRTIMETHGKKQKSGEYTLEPSICMTVQYLTILQDTLREVSFVSFQFEMD
WTECTYQQLILRSKTLPPKLQFTSLDKIVFKKREKTKADFLSYMVKMSDFLMPFLKDRAV
TVIRYPHGAPGESFFQKNKPDYTPDFVSSVFDGSHEHIVCSSIPSLLWLANQLALEFHVP
FQTVHSERPAEIVIDLDPPSRNDFPMAVEAAHVLKQLFDSFSMTSFPKLSGNKGIQLYIP
LSPEAFTYEETRAFTMLIADYCVRTRPDLFTTERFIKNRNGRLYLDYLQHAEGKTIIAPY
STRGNELGTVAAPLYWSEVNSSLTPDDYTIDTVVNRVRTEGDPFYDFYRNPQDGPLSIVL
EQIKRKS

NT seq 1824 nt +upstreamnt +downstreamnt
atgcagccgattttgacctctgtaccgcctgaaggcagtgagtggcgctatgaggtaaaa
tatgacggattccgctgtcttctccgcatagacgaaaacggtgttacattaaccagcaga
aacggacagacgctgacgaatcaatttccggaaatcacggcttttgcggcccggtgtttt
cagcacatgaaagacaggttccccattacgcttgacggagagcttgtctatttaatcaat
ccgtacagggcggactttgagcatcttcaaatccgcggacgtttaaaacgaaccgaagca
attaaaagcaccgctgagagacggccgtgccgctttctggcatttgatctcctcgttctg
gaaggcgccggcaccgtctcattaccgtatgtgaaacggaagcgcgccctttccaatctg
cttaaagaagcaaatcttcccgtctgccctcatcacttagcggaagaagcgattcaatac
attccggagcacactgactttgatgcgctttgggacaaggtcgtccgctatgacggagaa
ggtatcgtagccaaaagggcttccagcggatgggcggaaaataaacgctctcccgactgg
cagaagtataaacatatgaaaacggctcacgtgctattaaccggattcaatccgaagaac
gggtatgtgacggcctctgttttaaaagacggcatcgtcgtcccgatcgcttccgtgtcc
cacggcatgcaggcggaagaaaaaaacgccgtcagaaccattatggagacccacggaaaa
aaacaaaaaagcggcgagtatacacttgagccttctatctgcatgaccgtgcagtattta
accatattgcaggacacgctgcgtgaagtatcttttgtgtcctttcagtttgaaatggat
tggacggaatgcacgtatcagcagcttatcctccgctctaaaacgctgccgccgaagctg
cagttcacaagcctggataagatcgtttttaaaaaacgtgaaaaaacgaaagcagatttc
cttagttatatggtgaaaatgagcgattttcttatgccctttcttaaagatcgggccgtc
acggtgatccgttatccgcacggcgcgcctggcgaatctttctttcaaaaaaacaaaccg
gactacacgccggactttgtctcaagcgtgtttgacgggagccacgagcacatcgtatgc
agcagcataccgtcacttctatggctggctaatcagctggcgcttgaatttcacgttccg
tttcagacagtgcattctgaaaggcccgcagaaatcgtcattgatcttgatcctccgtca
aggaatgattttcctatggcagtggaggctgcgcatgtgctgaaacagctgtttgactca
ttcagcatgacgtcattcccgaagctctccggaaataaaggcattcagctttacatcccg
ctttcaccggaagcattcacctatgaagaaacccgtgctttcacaatgctcatcgccgat
tattgcgtcaggacacgcccggatctttttacgacagagcggtttatcaaaaaccgaaac
ggcaggctctacctagattatttgcagcatgccgaagggaaaaccattatcgccccctat
tcgacccggggcaacgaattgggaacggttgcggctcccctttattggagcgaagtcaac
tcctctttaacacctgatgattatacgatcgatacagtagtgaaccgcgtcaggacagag
ggagatccgttttatgatttttaccggaatccgcaggacggcccgctttcaatcgtgctt
gagcaaatcaagagaaagagctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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