KEGG   Bartonella sp. JB15: BJB15x_005610
Entry
BJB15x_005610     CDS       T05113                                 
Name
(GenBank) exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bart  Bartonella sp. JB15
Pathway
bart03410  Base excision repair
bart03430  Mismatch repair
bart03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bart00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BJB15x_005610
   03430 Mismatch repair
    BJB15x_005610
   03440 Homologous recombination
    BJB15x_005610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bart03400]
    BJB15x_005610
DNA repair and recombination proteins [BR:bart03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BJB15x_005610
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BJB15x_005610
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BJB15x_005610
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB QRPTase_C CDC45
Other DBs
NCBI-ProteinID: AQX27968
UniProt: A0A1S6XHA5
Position
628464..630248
AA seq 594 aa
MQRSRYLLNIQSSACGQVWVDALDVERVNNARAISQKFGLPDQLARVLAVRGVDESEAIT
FINPTLRTLMPNPKDFIDMHCAAERLVKAIINREKIAVFGDYDVDGACSAALLARFLHCF
GIIVKIYIPDRVIEGYGPNEQAMKGLVQEGASLIITVDCGANSPAAIKAARCAGADVIVL
DHHQMENVHEEAVALVNPNRPDDFSEQGHLCAAGVVFITLMWVNRLLREKKWGGALPDLL
SMLDLVALATICDVVPLQGVNRAFVVKGLQVARFMHNPGIAALAKVAHIGEPLNSFHFGF
LLGPRINAGGRIGNQALGTYLLSCNDRDEADRIAQQLDQLNKERQEMEMIQLAQAEVYID
SIYQGEAIPSSFVIAHKEWHPGIVGILAARLKERFFCPVLAIALKENGIGIGSGRSITGI
DLGALVHEAVALNLLEKGGGHSMAAGFTIQSRKIEIFRKWLEEKVSLMVSQLRAEKSLSI
DGFLSASGANKDLFDMIEKAGPFGSGNAKPVFVFPSHRLVNVYEVGKGNLRLVISDIEGK
KLQGIAFGAVGTSLGKFLSENIGKTIHLAGNLSLNYWRESVNPQLRVIDAATVI
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgcaacgatctcgttatttacttaatattcaatcctcggcttgcggtcaggtttgggtt
gatgctcttgatgtggagagggttaataatgctcgtgctatttctcaaaaatttggttta
ccggaccaacttgctcgagttcttgcagtaagaggtgtcgatgaatccgaagctattact
tttattaatccaacgttacgtactttaatgcctaatccaaaagattttatagatatgcac
tgtgcagcggagcgtttggttaaagctattataaaccgagaaaagattgctgtttttgga
gattatgatgttgatggtgcttgttcagcagcgcttttagcacgttttttacattgtttt
ggcataatagtaaaaatttatattcctgatcgtgttattgagggttatggtccaaatgaa
caagcaatgaaaggattggtacaagaaggggcgagtttaattattaccgttgattgtggt
gcgaatagtccagccgcaataaaagcagctaggtgtgcgggtgctgatgttattgtttta
gatcatcatcaaatggagaatgttcacgaagaagctgttgcccttgttaatcctaatcgt
cctgatgatttttctgagcagggacatttatgtgctgcgggtgttgtatttattacattg
atgtgggttaatcgtttattgcgggagaaaaaatggggaggagcgcttcctgatctttta
agtatgcttgatcttgttgcattggctactatatgcgatgtagttccattacaaggtgtt
aatcgtgcttttgtagttaaagggcttcaggtagcacgttttatgcataatcccggaata
gctgctttagcaaaggttgcgcatataggagaaccactcaatagttttcatttcggtttt
ttattgggacctagaattaatgcggggggacgtattggaaatcaggccttaggtacatat
ttgctcagctgtaatgatagagatgaagcagatagaatagcacaacaactggaccagctt
aataaagaacgtcaagaaatggaaatgattcaattagctcaagcagaagtttatattgat
tctatttatcaaggtgaagcaataccgtcatcatttgtgattgctcataaagaatggcat
ccaggtatcgttggtattcttgctgcccgtttaaaagaacgttttttttgtcctgtttta
gcaatagctttgaaagaaaacggaattggtattggatcgggtcgttcaattactggtata
gatttgggagcgcttgtgcatgaagcagttgcattaaacttattagaaaagggtggggga
catagtatggcggcagggtttacaattcagtcgagaaaaatcgaaatttttcgtaaatgg
ttagaagagaaagtatctttaatggtttcacaattacgtgctgaaaaatctcttagtata
gatggttttctttctgcttctggtgcgaataaagatctttttgatatgattgaaaaagca
ggtccttttggctcagggaatgctaaacctgtttttgtttttccttctcatcgcttagtt
aatgtatacgaggttggaaaaggcaatttgcgccttgttatttctgatattgaaggcaaa
aaattgcaaggaatcgcttttggtgcggtaggaacatcgcttggtaagtttctttctgaa
aatattggtaagacaatccatttagctggtaatttaagtttgaattattggagggaaagc
gtaaatccacaattacgtgttatcgatgcagccacagtaatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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