KEGG   Bartonella sp. WD16.2: BWD162_007010
Entry
BWD162_007010     CDS       T05203                                 
Name
(GenBank) RNAse E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
barw  Bartonella sp. WD16.2
Pathway
barw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:barw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BWD162_007010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:barw03019]
    BWD162_007010
   03009 Ribosome biogenesis [BR:barw03009]
    BWD162_007010
Enzymes [BR:barw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     BWD162_007010
Messenger RNA biogenesis [BR:barw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BWD162_007010
Ribosome biogenesis [BR:barw03009]
 Prokaryotic type
  rRNA processing factors
   BWD162_007010
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 DnaJ_CXXCXGXG AglB_L1
Other DBs
NCBI-ProteinID: AQX19821
UniProt: A0A1S6WU31
Position
complement(801621..804215)
AA seq 864 aa
MSNKMLIDASHPEETRVVVVHGNKIEELDFESEHKKQLKGNIYLARITRVEPSLQAAFVE
YGGNRHGFLTFSEIHPDYYQIPIADRLALLEEEEKAAIDENQADDLVEEIKQNKKDSRKT
KKSKNHNVLSVDSENNVISESMANDDGEEILDGNVFDDDIEMVGAEDALEELPTYQRKPV
RQYKIQEVIKRRQILLVQVIKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITN
IQDRKRLKDIVKELAVPKGMGVILRTAGANRTKVEIKRDYEYLMRLWETVRTLTLKSTAP
CLVYEEGNLIKRSIRDLYNKDINEILVSGDKGYREAKDFMRMLMPSHAKVVQPYRDPIPI
FTRNNIEAQLDKMLQPQVALKSGGYLVINQTEALVAIDVNSGRSTKEHSVEKTALQTNLE
AAEEIARQLRLRDLAGLIVIDFIDMLENRNIKLVEKKLKDCLKNDRARIQVGRISHFGLM
EMSRQRIRVSVLESTMQPCPHCAGTGNVRSESSIALHVMRSIEKYLLSHSQYNIIVRTSA
VIALYVLNHKRSILVDLETRFKLNISIEADDSVGAQHLVISRGTIAEKDHLSLLAIEDDN
KEEAEDTILMESKLTYDESPVENNQRYRRKDHKSELHDSFSTLSHKDDIQNNEDSRRRGR
RRGYRKGRRSQNNGFYQSRVPYAEPVGEFSKQALEEIKAAHRRYSIPTAEPVGFDEQNSD
AKHHVNVQQNTVFKAKKNHNAHPRKAFQGPKMPENDKSVTTSTPVEEKNTTDSIHKSKTK
KENKPTREIIEEISTGTKKSIRQTRKKVITKKTAQITEASEKETITKQAVEQISTEPVIS
SSVPEGESKTERIGWWKRRAFSKN
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgtcaaacaaaatgcttatagatgcctcccatccggaggaaacgcgtgttgttgttgtc
cacggcaacaaaattgaagaacttgattttgagtcagaacataaaaaacagcttaagggg
aatatttatctcgcacgtatcacacgtgttgagccatcacttcaagcagcctttgtagaa
tatggtggtaatcgccatggttttttaacattttcagaaattcaccctgattattatcaa
attcctattgctgatcgtcttgctcttcttgaagaagaagagaaagctgctattgatgaa
aatcaagcagatgatctcgttgaggaaataaaacagaataaaaaagattcaagaaaaaca
aaaaaaagtaagaaccataacgttctttctgtagatagtgaaaacaatgtcatatctgaa
tcaatggcaaatgatgatggagaagaaatacttgatggaaatgtttttgatgatgatatt
gaaatggtgggtgcggaagatgctcttgaagaactccctacttatcagcgtaaaccggtg
cgccaatataagattcaagaagttattaaacggcgtcaaattttattagtacaagtgatc
aaagaagagcgtggcaataaaggtgcagcactcacaacttatttatcattggcaggtcgc
tattcagttttaatgccgaacacggcacggggtggtggtatttcccggaaaattaccaat
atacaagatcgcaaacgtctcaaagacattgtaaaagaattagcagttccaaaaggtatg
ggtgttattctacgaactgctggagctaatagaacaaaagtcgaaattaaacgtgattat
gaatatctcatgcggttatgggaaactgttcgtactttaacactcaaatcaaccgcgcca
tgtctagtttatgaggaaggtaatttgataaagcgttccattcgcgatctttataataaa
gacattaatgaaattcttgtgtctggtgataaaggatatcgtgaagctaaagattttatg
cgcatgttgatgccaagtcatgcaaaagttgttcagccttatcgtgatcctatacccatt
tttacgcgtaacaatatcgaagctcaactagataaaatgttgcaaccacaggttgcttta
aaatctggtggttatcttgttattaatcagacggaagcacttgtcgctattgatgtaaac
tctggtcgttctaccaaagaacattctgttgaaaaaacagcgctacaaaccaatcttgaa
gctgcagaagaaatagctcgtcaattacgtttacgtgatttagcaggcttaattgtgatt
gatttcattgatatgcttgaaaatcgtaacattaagcttgttgaaaaaaagctgaaagat
tgtttaaaaaatgatcgtgcccgtattcaagttggtcgtatctcacattttggccttatg
gaaatgagccgtcaacgcattcgtgtatcagttctagaaagtacaatgcagccttgtcct
cattgtgctggaactggaaatgtacgttcagaatcatcaattgccttgcatgttatgcgc
tcaattgaaaaatatcttcttagtcattcgcaatataatatcattgtgcggacatctgca
gtgatagcactttatgtactcaaccataaacgcagtattcttgttgatttagaaacgcgc
tttaagcttaatattagtattgaagcagatgatagcgttggagcacagcatttagttatt
tccagaggaacaatagcagaaaaagaccatttatctctactagctattgaagatgataat
aaagaggaagctgaagatacaatcttgatggaaagcaaattaacttatgatgagtctcct
gttgaaaataatcaacggtatcggcgtaaagatcataaaagtgaattacatgacagcttt
tctacactctctcataaagatgatattcaaaataatgaggatagccgccgtcgtggacgt
cgtcgtgggtaccgtaagggtcgacgtagtcaaaataacggtttttatcaatctcgtgtt
ccttatgctgaaccagtcggagaattttccaaacaggctttagaagaaattaaagcagcg
catcgccgatattctattccaactgctgaacctgtaggatttgatgaacaaaacagtgat
gcaaaacatcatgtcaatgtacaacaaaatactgtttttaaagctaaaaagaatcataat
gcacatcctcgaaaggcatttcaaggcccaaaaatgcccgaaaatgataaaagtgtgaca
acatcaacacctgttgaagaaaaaaacactaccgactctattcataaatctaaaacaaaa
aaagagaataaaccaactcgtgagataattgaagaaatctcgacaggtacaaaaaaatca
atacgtcaaacaagaaaaaaagttattacgaaaaaaacagctcaaataactgaagcatca
gaaaaagaaactataacaaaacaagctgttgaacaaatttctaccgaacctgttatttca
tcatcagtacctgagggagagagtaaaactgaacgcattggatggtggaagcgcagagct
ttctcaaagaactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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