KEGG B.aphidicola_Sg: BUsg026

Buchnera aphidicola Sg: BUsg026

Entry

BUsg026 CDS B.aphidicola_Sg

Gene name rpoH

Definition RNA polymerase factor sigma-32

Orthology K03089 RNA polymerase sigma-32 factor

Class Genetic Information Processing; Transcription; RNA polymerase
[PATH:bas03020]

SSDB

Motif Pfam: Sigma70_r4 Sigma70_r2 UCR_14kD GerE DUF3562 Phage_terminase
HTH_10
PROSITE: SIGMA70_1

Other DBs NCBI-GI: 21672319
NCBI-GeneID: 1005842
UniProt: Q8KA76

Position 25214..26071

AA seq 285 aa
MTNKVQILSVTALGNLDAYIRIANLWPMLSIKEEKLLTKRLRYHDDLDAAKTLILSHLRF
VIHISRNYSGYGLLQADLIQEGNIGLMKAVRRFNPDIGVRLVSFAVHWIKSEIHEYVLRN
WRIVKVATTKSQRKLFFNLRKNKKRLGWFNQEEIEIVARELGVSSEDVREMESRMSAQDI
TFNPFPEEDLKDGKINGNMFYLQDKTSNFANGLEQDNWNKHTTSKLSNALLRLDERSRNI
IRARWLDKKEKNTLQKIANNYGISAERVRQLEKNAMKKLKIAIEN

NT seq 858 nt +upstreamnt +downstreamnt
atgaccaataaagtacagattttatctgtaacagcactaggtaatttagatgcttatatt
cgaatagctaatctatggccaatgttgtcgattaaagaagaaaaattattaactaaacgt
ttacgctatcacgatgatttagatgctgcaaaaactttaattctttctcatcttcgtttt
gttattcatatttcacgtaattattcgggatacggtttactccaagctgatttaatacag
gaaggtaatataggtttaatgaaagcagtacgtagattcaatccagacataggagtacgt
cttgtttcttttgctgtacattggattaaatcagaaatacatgagtatgtattgcgtaat
tggcgaattgtaaaagtagcaacaactaagtctcaaagaaaattattttttaatttaaga
aaaaacaaaaaaagattaggttggtttaatcaagaagaaattgaaatagttgctcgagaa
ttaggtgtaagcagtgaagatgtcagagagatggagtctagaatgtcagctcaagatata
acttttaatccttttccagaagaagatttaaaagatggaaaaattaatggaaatatgttt
tatttacaagataaaacatctaattttgcaaatggattagaacaagataattggaataaa
catactacaagcaaactaagtaatgctttgttaagattagatgagcgaagtcgaaatatt
attcgtgcacgttggttagataagaaggaaaaaaacactttgcaaaaaattgcaaataat
tatggaatatctgccgagcgtgttagacaattagaaaaaaatgctatgaaaaaattaaaa
atagcgatagaaaattaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (7)   
   PROSITE (1)   
All databases (18)

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