KEGG   Bifidobacterium asteroides: BAST_1545
Entry
BAST_1545         CDS       T02271                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bast  Bifidobacterium asteroides
Pathway
bast03030  DNA replication
bast03430  Mismatch repair
bast03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bast00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BAST_1545
   03430 Mismatch repair
    BAST_1545
   03440 Homologous recombination
    BAST_1545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bast03032]
    BAST_1545
   03400 DNA repair and recombination proteins [BR:bast03400]
    BAST_1545
Enzymes [BR:bast01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BAST_1545
DNA replication proteins [BR:bast03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BAST_1545
DNA repair and recombination proteins [BR:bast03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BAST_1545
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_30 AAA_22 zf-CXXC AAA_14 DEAD AAA_19 Rad17
Other DBs
NCBI-ProteinID: AFU72114
UniProt: K4INY1
Position
complement(1970323..1973265)
AA seq 980 aa
MALALYRRYRPDTFDGIIGQKQVTVPLTRALDENRLTHAYLFSGPRGCGKTSSARIFARC
INCAKGPTSHPCGECDSCRDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPVRDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFIFATTEPEKVIGTIRSRTHHYPFRLVP
QEVMGPYLEDICEKEGIKAEPGVLKLAMRAGGGSVRDTLSVLDQLMVGADEHTITYDAAV
ALLGFTPATLITDAVDALIAHDGADLYGVIQKVVVGGFEPQRFVEDLLAHVRDLLVLKLA
GDRAESVLSEDADDDQVADLHRQADALDLQVLTRMADIINDALAGMNGATSPRMRLELLA
ARLLAIGCEHMEQVPAAGATSTVGPTPAPARSGFIGADRSQQNGRPSRASQSGSADSVDR
PEQPGRAGSSSAAAPASFAGPQNIAGSHSDSPAGGKREGEGRRTHSGSGSIQPEHKQAPS
SPTGQTAGQVGSSNPSGPARSPEPLRSVQPQAMRGQEAEIPTGTELDKRWDALVAALPDE
VRQYVVRDRVPTVAMKADPSGRKRLSMTFDRPLSQHAFAMAVAAQSVDGETKVPRIVMVR
ARQEFGQATMIAPSGTAANGETVESVNKMSPQRRAEVKKEVALARAGLATMNLGAAVMPH
AATEQGHAPREMTASAGHEGETGASAPEGRSTPGEASGDGNSDDAHHPVGGPVQSSSEPL
PAAGFGSTASTVLPDDDPWAHPMPATHTPQRVWRSGEGSDGSDGQKDHESKKVALPDMSD
DTDPWAVPDSGASAAAPAESSGSQGHETTNQRLEVSKSVDSSGQGSVSSATSAPTLETGS
VSDEGAMATGISTSSDVQSDDHGSDAAGGLVGIQAAAKVPGAEDRRMPAGFAGPASGGPS
QDGASSAAVSSQAPRPSVDPEDDVYSMDDARLGADNAMNQDELTKMFDVTKVEDFAADDP
QNPINVQKRRQEQAQRQGGE
NT seq 2943 nt   +upstreamnt  +downstreamnt
atggcactagcactctatcggcggtatcggcctgacacttttgacggcatcatcggtcag
aagcaggtcacggtgccccttacccgagctctggatgagaatcggctgacccatgcctat
ctcttctccggtcctaggggatgtggaaagaccagcagtgccaggattttcgcccgctgt
attaactgtgccaagggaccgaccagccatccctgcggcgaatgcgacagctgcagggat
ctggccaccggaggccccggttccattgatgtggtggagattgacgccgccagccataat
ggcgttgacgatgcgagggaactcagggagcgagcaggtttcgcccccgtgcgcgaccgg
tacaagatctttattttggatgaggctcatatggtcacccagcaaggtttcaatgccctg
ctgaagatcgtcgaggagccgccggaacacgtcatgttcatcttcgccaccacagagccg
gagaaggtgatcggcaccatccgctcccgcacccaccattaccccttccgtctggtgccc
caggaagtcatggggccttacttggaggatatttgcgaaaaggagggcatcaaggccgaa
cctggtgtgctcaagctggccatgcgggctggaggcggttctgtgcgtgacaccctttcc
gtgctggaccagctcatggtaggcgccgacgagcacaccatcacctatgatgcggctgta
gctctgctggggttcactcctgccacactgatcaccgacgccgtggatgcgctgatcgcc
cacgatggagctgacctctacggggtcattcaaaaggttgtcgtcggcgggttcgagccc
cagcgcttcgtcgaggatctgctagcccatgtccgcgacctgctggttctcaaactggcg
ggagaccgggctgaaagcgtgcttagcgaggatgccgacgacgaccaggtggccgatctg
catcggcaggcggatgcattggacctgcaggtcctgaccagaatggctgacatcatcaat
gatgcgctggcgggaatgaatggagccacctcgcccaggatgcgcttggagctgctggct
gccaggctgctggcaattggttgcgagcatatggagcaggtacccgccgcaggggcaact
tccaccgttggtccgaccccagcgccagcccgcagcgggttcatcggcgctgacaggtct
cagcagaacggtcggccgtccagagcatctcagtctggtagtgctgacagcgttgatcgc
cctgaacaacctggcagagcaggatcgtcgtctgcagcagcgcccgcttcctttgccgga
ccacagaacatagcaggttcccattccgattccccagccggcggaaagcgagagggcgaa
ggacggcgcacccattcaggctcaggctctatccaacccgagcacaagcaagccccctcc
tcgccgactgggcagacggcggggcaggtcggatcatccaatccttccggacccgcccgg
tctccggaaccgcttcggtctgtacaaccgcaggctatgcgaggacaggaagcagagatt
ccaactggtacggaactggataagcgctgggatgccctggtggctgccctgccggatgag
gtccgccaatatgtggtgcgggaccgtgtgcctactgtggccatgaaagcagatccctca
ggccgcaagcgactgtccatgaccttcgaccgtccgctcagccagcatgctttcgccatg
gccgtggctgcgcagtcggttgacggggagaccaaagttccgcgtattgtcatggtccgc
gctcgccaggagtttggacaggccaccatgatcgccccatcagggacggctgccaacggc
gaaacggtagagtctgtcaacaagatgtctcctcagcgtcgagcagaggtcaagaaggaa
gtggctctggcacgggccggcttggccaccatgaaccttggagcggcggtcatgcctcat
gcagccacggaacaggggcatgcccctagggagatgacagcctcggctggtcatgagggt
gagactggagcatcggcacctgaggggaggtccacccctggagaagcttcaggtgatggg
aactccgacgacgcccaccacccggtcggcggtccggtccagtcgtcttcggaacccctg
ccggcggcgggctttggctcaactgcttctacggtattgccggacgatgatccctgggca
catcccatgccagcgacgcatacgccgcaaagggtctggcggtccggtgagggtagcgac
ggatccgatggtcagaaagaccatgagtccaaaaaggtagctctgcccgacatgagcgat
gacacggatccttgggccgtgcccgattccggggccagtgccgcagcccctgcagagtcc
tctggcagtcaaggccatgagactacgaatcagaggcttgaagtttcgaagtcggttgat
tcatctggtcagggaagcgtctcgagtgcaacctcggctccgacattggagaccggatcg
gtttccgatgaaggggccatggcgactggcatatcaacctcgtcggacgtgcagagcgac
gatcacggttctgatgccgccggcggcttggttggcatccaggcagcggcaaaggtccct
ggagctgaggacaggagaatgcccgcaggcttcgctggtccggcttccggtggccccagt
caggatggagcctcgtctgctgctgtttcctcccaggctccaaggccgtccgtggatccc
gaggacgacgtctattccatggacgatgccaggcttggggcggacaatgccatgaaccag
gatgaactgaccaaaatgttcgacgtgaccaaggtagaggattttgctgctgacgacccc
cagaatccgatcaacgtccaaaagcgccggcaggaacaggcgcagcgacagggaggtgaa
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

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