KEGG   Bordetella avium: BAV0533Help
Entry
BAV0533           CDS       T00695                                 

Gene name
mutM
Definition
(GenBank) formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bav  Bordetella avium
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bav00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    BAV0533 (mutM)
Enzymes [BR:bav01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BAV0533 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BAV0533 (mutM)
DNA repair and recombination proteins [BR:bav03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BAV0533 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
Position
complement(554522..555349)
Genome map
AA seq 275 aa AA seqDB search
MPELPEVETTRRGIDPVITGQTLRRLVVREPRMRWPIPADLPSLLTDRPVLATGRRGKYL
LLRFEHGVQIVHLGMSGSLRRVAMDEAPRKHDHVDWVFDHAILRLHDPRRFGAVLWHPNT
DGPVEAHPLLIGLGIEPFDPRFDGKWLHDHFRDKRVAVKQALLAGHAVVGVGNIYASECL
FRAGIDPRTPAGKLSRPRCERLAQAVRATLADALASGGSTLRDYVGASGEPGAYFAIHAA
VYERAGLACRVCGTPIRRLVQGQRATYFCPHCQKR
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactgcctgaagtagaaaccacgcgccggggaatcgaccctgtcatcaccggc
cagacactgcgccgccttgtcgtacgggagccacgcatgcgctggcccatccccgccgac
ctgccctctcttctgacagaccgcccggtgctggccaccggccgccgcggcaaatacctg
ttgctgcgctttgagcacggcgtgcagatcgtgcatctgggcatgtcgggttcgctacgc
cgggtagccatggacgaggcgccacgcaagcacgatcacgtcgattgggtctttgatcac
gccatcctgcggctgcacgatccgcgccgctttggcgccgtgctctggcatcccaacacc
gacgggcccgtcgaggcgcatcccctgctgatcggcctgggcattgaaccctttgatccg
cgttttgacggcaaatggctgcacgatcactttcgtgacaagcgggtcgccgtgaaacag
gccctgctggctggccatgccgtggtcggcgtgggcaatatctacgcatcggagtgcctg
ttccgggcgggtatcgacccgcgcacgcctgccggcaagctgtcgcgcccgcgctgcgaa
cggctggcccaggccgtgcgcgctacgctggccgatgccctggcttcgggcggcagcacc
ctgcgcgattacgtcggggcgtcgggcgagccgggcgcttatttcgccatccatgcggcg
gtttacgagcgcgccggactggcttgccgggtgtgcggcaccccgatccggcgcctcgtg
caggggcagcgggctacgtatttctgtccccattgccagaaacggtaa

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