KEGG   Bdellovibrio bacteriovorus HD100: Bd0235
Entry
Bd0235            CDS       T00159                                 
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
bba  Bdellovibrio bacteriovorus HD100
Pathway
bba03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bba00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bd0235 (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bba03019]
    Bd0235 (rhlE)
Enzymes [BR:bba01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     Bd0235 (rhlE)
Messenger RNA biogenesis [BR:bba03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Bd0235 (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_19 ERCC3_RAD25_C ssDNA-exonuc_C RhlB AAA_22 UvrD-helicase
Other DBs
NCBI-ProteinID: CAE77894
UniProt: Q6MR64
Position
complement(220904..222421)
AA seq 505 aa
MTTTKFTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSL
PILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQ
VRALQGGVDILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLP
QKRHNLFFSATMPHEIQTLANRILVNPKKVEVTPVSSTAEKVEQRVMFVDKPQKLDLLLH
ILKDESLSKVLVFVQMKYGANRVVDRLTKAGVAAAGIHGDKSQNQRQRALEEFKNGDVRV
LVATDIAARGIDIDGITHVINLELPHIPESYVHRIGRTARAGATGISISFCTAEERSFLF
AIEKTTRTKVTVVEDHPFHSTEIANAPVMTVGKAKAILEGQRLQNKAKNRGGGPRRQGGG
APQGGHGGKKAGGKPQGGNKPDHGGKTHTKSEHKSEGAASHKTHSKPAHAKPAHKPAHKS
EGKSAGKSEHAPKKRSFWSRLRNKD
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgacgacgactaaatttaccgaccttcctttgattgcccctcttcaattttcacttaaa
gaagcaggatacgaaactccaaccccgattcagttggcagcgatccctgttattcttgaa
gggcacgacctattgggcatcgcccagaccggcaccgggaaaactgcggcgttttctttg
ccgatcctgcaaaacctttccaaacacacacgcaagatcgaaccgaaatccccgcgttgc
ctgattttgactccgacccgcgagctggcgattcagattcacgaaaacatcgaggcttac
agcaaacacctgaacatgaaacacgctgtgatcttcggcggcgtgggacaaaatccccaa
gtgcgcgccctgcaaggtggcgtggacattctgattgcgactccgggccgcctgatggac
ctgcacggacaaaagcacctgaagctggatcgcgtggaaatctttgtactggatgaagcc
gaccgcatgctggacatgggcttcatgcaggatattaaaaagatcctgcccctgcttccg
caaaaacgtcacaacctgttcttctctgcaaccatgccacacgagattcagactttggcc
aacaggattctggtgaatccgaaaaaagtggaagtgactccggtttcttcaacggctgaa
aaagttgaacagcgtgtgatgttcgtagacaaacctcagaagctggatctattgctgcac
attctgaaagacgaatctttgtccaaagtgctggtatttgtgcagatgaaatacggcgcc
aaccgcgtcgttgaccgactgacgaaggcgggcgttgcggccgccggcattcacggcgac
aaatcccagaaccagcgtcagcgtgcgctggaagaattcaaaaacggcgatgtgcgtgtg
ttggtagcgactgacatcgccgcccgtggtattgatatcgacggcattactcacgtgatc
aacctggagcttccgcacattccggaatcctacgttcaccgtatcggaagaaccgcgcgc
gcaggcgctaccggtatttctatttccttctgcactgctgaagaaagatccttcctgttt
gcgattgaaaaaaccacacgcacgaaagtcactgtggtcgaagatcatccgttccattcc
accgaaattgccaacgctccggtgatgaccgtgggtaaagccaaagcgattctggaaggc
cagcgcctgcagaataaggctaaaaatcgcggtggcgggccaagacgtcaaggcggtggc
gcccctcaaggcggtcatggcggaaagaaagcgggaggcaaacctcagggcggcaataag
cctgatcatggtggcaagactcatactaaatccgagcacaaatctgaaggtgccgcttcc
cacaaaactcacagcaaacctgcgcacgcaaaaccggctcacaaacctgctcacaaaagt
gaaggcaagtctgctggcaaaagtgagcacgctcccaagaagcgcagcttctggagccgt
ctgcgcaacaaggactaa

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