KEGG B.bacteriovorus: Bd0384

Bdellovibrio bacteriovorus: Bd0384

Entry

Bd0384 CDS B.bacteriovorus

Gene name dnaE

Definition DNA polymerase III, alpha chain (EC:2.7.7.7)

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway bba00230 Purine metabolism
bba00240 Pyrimidine metabolism
bba01100 Metabolic pathways
bba03030 DNA replication
bba03430 Mismatch repair
bba03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:bba00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:bba00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:bba03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:bba03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:bba03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP tRNA_anti

Other DBs NCBI-GI: 42521998
NCBI-GeneID: 2733452
UniProt: Q6MQS6

Position complement(358792..361977)

AA seq 1061 aa
MTNKALIPSQNSRLPAKPRPRAKGFVELLGRSNFSFLQGASSPEEMVSQAVEFGYDGMAL
CDLNGLYGVVRGFQTIQSPSLFTASPQVKENFHYLIGSELTLTDESSVVLIPMNKQGYSH
LCEILTLGKRQAAKGFSKLSLEQIEKYNQGLLCLALPPWTDERYEKLEKIFDNRLYLPLW
RDLTWESQEFCRQGFALEEKYKAQLFVTQRPFMHSPERKPLFDVLTCTLHHTTLAEAKNK
LIQNSERCLKSLEDISWLWQDRLDLVEKTVEISARVTFSLNEIRYRYPASSLPSGMTPTE
YMRHLTLKGAESRYPEGIPDKALKQIEHELELIKDLQYEDYFLTLKEICDFASERKILYQ
GRGSAANSVVCFCLGLTAIDPVKMDLLFERFLSRERREPPDIDIDFEHSRREEVIQHIYE
KYNERHAAMVCTVIRYRSRMAIRETAKVFGMPLAKINAMIKFMGRDGMKRLLDPAVAADF
GMEPGPWKMFMALAQQLHGFPRHLGIHTGGFLITQDPITEMVPVEKATMNGRYVIQWNKD
DVDFLRLMKIDVLSLGMLTCLRKCFDLLRDVKGRDYSLATLPADDKPTYDMICRAETVGV
FQIESRAQMNTLPRMQPRNFYDLVIEIALIRPGPLQGGMVHPFLKLRQNPPKEIKYAHPA
LEPILKKTMGIPIFQEQVMKMVVAVADFTPGEADELRRVMSSAWKRKATMGGIEQRLRTG
FARHGISSEYADQIFKTIEGFANYGFPESHSASFALLTYASCYLKCHYPDVFACGLLNSQ
PMGFYAPRTIIAEAQRNGVVVAPLDVQKSDYDYTIEKTAAGDLLRVGLRSIYGIPEVLIR
RIEDSRKEEGLYIDLADFIRRTQLPRSVLLKLAAAGAFESFNSNVRELIWNLESLSLDQQ
SFLWGHPKEQFELGEDDDEPEHLPFESNWDRLRREYDSKGYSVESHPMSVLRTYLHSKSE
ALREKRFVPYFSSEDLKRMKTKTKVRVAGLVAITQRPPTAKGMCFITLEDEFGFVNIVIH
PEIYQKDRTTIYTRSLLEIHGQVEKVGAITNIRAERILPLG

NT seq 3186 nt +upstreamnt +downstreamnt
ttgactaataaagccttaattccttcccaaaattcgcggctgccggccaaaccccggccg
cgggccaaaggattcgtcgaacttctggggcgcagtaacttttcatttctgcaaggggct
tccagccccgaagaaatggtgtcgcaggccgtggagttcggttacgacggcatggccctg
tgtgatctgaatggattgtatggcgtggttcgtggttttcagaccatccagtcgccttct
ttgttcaccgcctcgccgcaagtgaaggagaactttcattatctgatcggatcggagctg
actttgacggatgaaagttccgttgtgctgattccgatgaacaaacagggctattcgcat
ctgtgcgaaatcctcactttgggaaagcgccaggccgccaaggggttttccaaactcagc
ctggaacagattgaaaaatacaatcagggtcttttgtgtctggcccttccgccctggacg
gacgagcgctatgaaaagctggaaaagatttttgacaaccgtctgtatctgcctctgtgg
cgggatctgacctgggaatcccaggaattctgccggcagggttttgcgctggaagaaaaa
tacaaggctcaactttttgtcacccagcgcccgttcatgcacagcccggaacgcaagcct
ctgtttgatgtcctgacttgcacccttcatcacaccacactggccgaagccaaaaataaa
ctgattcagaattctgaaagatgcctaaaaagcctcgaagatatctcctggctgtggcag
gaccggctggatcttgtggaaaaaactgtggagatctcggcacgtgtgacgttctcatta
aacgagatccgttaccgctatcccgcatccagcttgccttccgggatgactcccaccgaa
tacatgcgccacctcacattgaagggcgccgaaagccgctaccctgagggcattcctgac
aaagccttaaaacagattgaacatgagctggagctgatcaaggaccttcaatacgaagac
tactttctgactttgaaagaaatctgtgactttgcctcggaaagaaagattctttatcag
ggccgtggctccgccgccaattcggtggtgtgtttttgcctgggattgacagccattgat
ccggtgaaaatggatctgctgtttgaacgttttttatcgcgcgaacggcgggaaccaccg
gacattgatatcgactttgagcacagccgccgcgaggaagtgattcagcacatctacgaa
aagtacaacgaacgccatgccgccatggtgtgcacggtgattcggtatcgctcgcgcatg
gctattcgcgaaaccgccaaggtgtttggcatgcccctggccaagatcaatgccatgatc
aagttcatgggccgtgacgggatgaaacgcctgctggatcccgcggtggcagcggacttt
ggcatggagccgggtccttggaagatgttcatggctctggcccagcagctgcacggattc
ccccgccacctcggcattcacaccggcggctttctgatcactcaggatcctatcaccgaa
atggttcccgtggaaaaagccaccatgaatggccgctatgtcattcagtggaacaaagac
gatgtggactttctgcgcctgatgaagattgatgttttaagcctgggcatgctgacttgc
ctgcgcaagtgctttgatcttttacgtgatgtgaaaggcagggactacagccttgccacc
ttgcccgccgatgacaaacccacttacgacatgatctgccgcgcggaaacagtcggcgtc
tttcagattgaatcccgcgcgcagatgaacactttgccgcgcatgcaacccaggaacttt
tatgatctggtcatcgagatcgccctgatccgtccgggtcctttgcaagggggcatggtg
catccgttcttgaagctgcgccagaatccccccaaagaaatcaagtatgcgcacccggcc
ctggaaccgattctgaaaaaaaccatgggaattccgatctttcaggagcaagtgatgaag
atggtggtggccgtcgcggacttcactccgggagaggctgatgaactgcgccgggtgatg
tcctcggcctggaagcgcaaagcgaccatgggtggtatcgagcagcgcctgcgcacgggg
tttgcccgccacgggatttccagtgaatacgcggatcaaatcttcaaaaccatcgaaggc
tttgccaattacgggttccccgaaagtcactcggccagctttgctctgttgacttatgcc
agctgctatctgaagtgccactatccggatgtgtttgcctgcgggcttttgaacagtcag
cccatgggcttttatgctccccgcacgatcatcgccgaggctcaaagaaacggcgtggtg
gtggcacctctggatgtgcagaaatctgattatgactacaccatcgaaaaaacggccgcc
ggggatctgctgcgtgtgggcttaagatcaatctatggtattcccgaagtattgatccgt
cgaatcgaagacagccgcaaagaagaaggactgtatatagacctagcggactttatccgt
cgcacgcagcttcctcgcagtgtgcttttaaaacttgccgccgcgggggctttcgaaagc
tttaacagcaatgtgcgggagctgatctggaatctggagtcgttaagtcttgatcagcaa
agcttcctgtggggtcatccgaaagaacagtttgagctgggtgaggacgatgatgaaccc
gaacacctgccgtttgaatccaactgggaccgcctgcgccgggagtacgacagcaaggga
tactccgtggaatcccacccgatgtcggtgcttagaacctatctgcacagcaaaagcgaa
gctctgcgtgaaaaacgtttcgtgccttatttttcttcggaagatctgaaacgcatgaaa
acaaaaaccaaagttcgggttgccggcttggtggctatcacccagcgtccgcccaccgcc
aagggaatgtgttttatcactctggaagacgagttcggttttgtgaacatcgtcattcac
ccggaaatctatcagaaggaccgcaccacgatttacacccgttcgctgctggaaatccac
ggccaggttgaaaaagtgggggccatcaccaatatccgcgccgaacgcattctgcctctg
ggataa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)

DBGET integrated database retrieval system