KEGG   Bdellovibrio bacteriovorus HD100: Bd2950
Entry
Bd2950            CDS       T00159                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bba  Bdellovibrio bacteriovorus HD100
Pathway
bba03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bba00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Bd2950 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bba03021]
    Bd2950 (rpoA)
   03400 DNA repair and recombination proteins [BR:bba03400]
    Bd2950 (rpoA)
Enzymes [BR:bba01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Bd2950 (rpoA)
Transcription machinery [BR:bba03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Bd2950 (rpoA)
DNA repair and recombination proteins [BR:bba03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Bd2950 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L
Other DBs
NCBI-ProteinID: CAE80725
UniProt: Q6MJ36
Position
complement(2860422..2861420)
AA seq 332 aa
MIKPKGFEVDRDSLRDDYAKFIIRPLERGFGVTLGNSLRRILLSSMMGSAITAVKFEGVL
HEFTTIPDVLEDVTDIILNLKEVRFKQYTADSLTLKISKKGPGKVTAADIQTTDKIEVLN
PDLPIATLGANANFNAEIVVSFGRGYVPVENRETDLPVGFIGVDALYSPIRKVNYNVSNA
RVGQRTDYDALTLEVWTDGSLKPEEAVALSSKIMKEQLQIFLTFDETMEPAEEARELGSP
TLNENLFRSVDDLELSVRSANCLKNANIRYIGELVVRSEAEMLKTKNFGRKSLNEIKEIL
GEMGLGLGMKIEGWPPAGWDPSQPPQKRETQQ
NT seq 999 nt   +upstreamnt  +downstreamnt
atgatcaaaccaaagggatttgaggttgatcgtgattctcttcgtgatgactacgctaaa
ttcattatccgtccccttgaaagagggtttggcgttaccttgggtaactccctaagaaga
attcttcttagctccatgatgggttctgcaattacagctgttaagttcgaaggcgtattg
cacgagttcactacgatcccagatgttcttgaggacgtcactgacatcatcctgaacctc
aaagaagtgcgctttaaacagtacactgcagattctttgactttgaagatctccaaaaaa
ggtccaggcaaagtaactgcagcggacatccaaactaccgataagatcgaagttttgaac
ccagatcttccaatcgctactttgggcgcgaacgcaaacttcaacgcggaaatcgttgta
agtttcggtcgtggttatgtaccagttgagaacagagaaactgatcttccagttggcttt
atcggcgttgacgctctttacagcccaatcagaaaagtgaactacaatgtttccaatgcg
cgcgttggtcaaagaactgactacgatgcattgactcttgaagtttggacagacggttct
ttgaagccagaagaagctgtagctctttcatccaaaatcatgaaagaacaactgcaaatc
ttcctgactttcgacgagactatggagcctgcggaagaagcacgcgagcttggttctcca
actctgaacgagaacttgttccgttctgttgatgaccttgagctttctgttcgttctgcg
aactgcttgaaaaacgctaacatccgctacatcggcgagttggtagtacgttctgaggcg
gaaatgcttaaaaccaaaaacttcggccgtaaatctttgaatgaaatcaaagaaatcctg
ggcgaaatgggattgggccttggcatgaagatcgaaggctggccaccggctggttgggat
ccaagtcaacctcctcaaaagagagagactcaacagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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