KEGG   Bdellovibrio bacteriovorus Tiberius: Bdt_0004
Entry
Bdt_0004          CDS       T02356                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
bbat  Bdellovibrio bacteriovorus Tiberius
Brite
KEGG Orthology (KO) [BR:bbat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbat03032]
    Bdt_0004 (gyrB)
   03400 DNA repair and recombination proteins [BR:bbat03400]
    Bdt_0004 (gyrB)
Enzymes [BR:bbat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Bdt_0004 (gyrB)
DNA replication proteins [BR:bbat03032]
 Prokaryotic type
  DNA Topoisomerases
   Bdt_0004 (gyrB)
DNA repair and recombination proteins [BR:bbat03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Bdt_0004 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3 Toprim_4
Other DBs
NCBI-ProteinID: AFX99717
UniProt: K7YQ76
Position
3957..6401
AA seq 814 aa
MQSNEGFPVSAEEQKSYSADSIQVLEGLEAVRKRPGMYIGDTAFKGYHHLVYEIVDNSVD
EHLAGYCKKISVSINADESITVEDDGRGIPVATQKQTGKSALELVMTVLHAGGKFDGGGY
KVSGGLHGVGASVVNALSDRVSVEVQRDGHFWRQNYERGKILAPVAQGETTTKTGTKVTF
KPDRTIFKDETLSYDFTTLANRFRELAFLNAGLHISLTDERNGKKQDFQYSEGVAEFVKY
MNQSKKSLHNEVVYFKGEKDNVEVEIAMQWNDSYSESVFTYCNNINTHEGGTHLVGFRAA
LTRTTNAYATEKNLLKDLKANLEGEDIREGLAAVISVKVREPQFEGQTKTKLGNAEVKGI
VETLVNEKLADWMDRNPSVAKNIIMKCVESARAREAARKARDLTRRKTVLDGGSLPGKMA
DCQERDPALCELYLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKIISSEEIK
VIISALGTGIGKDNVNVDKIRYHKIIIMTDADVDGSHIMTLLLTFFYRQMPLVLERGYVY
IAQPPLYRAKKGKEETYLKNEAALTEYLLSSGLGNFKIKGKESLPEKDLRQLILNIQRFN
DLLRVSSKKYDKDVLYFLLSKVTDFEKTFTDAKKIEQVLTDLGAWVNSDQTLGITEYKGE
VKTEAETGKMYADIYTVRYADRMTTKFSTDNLRSSEIIELRKIWADIQAISTLPLTILEG
ENEVQFENYNDFYTHVMESTKKGIYIQRYKGLGEMNPEQLWETTLNKENRTLLKVTIDDA
VAADETFSILMGEMVEPRRQFIHDNALLARSLDV
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgcaaagcaatgaggggttcccagtgtcagcagaagaacaaaaatcctattcggccgat
tcaattcaggttctagaaggtcttgaggcagttcgtaagcgtcccggtatgtatatcggt
gataccgctttcaaaggctaccatcaccttgtgtatgaaattgtggataactcggtagac
gaacacttggctggctactgcaaaaaaatcagtgtctccatcaacgccgatgaatccatc
actgtcgaagatgacggtcgtggtattccggttgctactcagaaacaaaccggcaaatct
gcgcttgagctggttatgaccgttctgcacgccggtggtaaattcgacggcggcggttat
aaagtatccggtggtttgcatggcgtgggtgcttctgttgtgaatgcactttctgaccgt
gtgtctgttgaagttcaacgtgatggtcacttctggagacaaaactacgagcgcgggaaa
atcctggcgccggtggctcagggtgaaaccaccacaaaaaccggaacgaaggtgactttc
aaaccggatcgcacaatcttcaaagatgaaactttgagctacgacttcaccactttggcg
aatcgtttccgtgaattggcgttcctgaatgcgggcctgcatatttctttgaccgatgaa
cgtaacggcaaaaagcaggacttccagtattcagaaggtgtggctgaattcgtgaagtac
atgaatcagtccaaaaaatccctgcacaatgaagtggtttacttcaaaggcgaaaaagac
aacgtcgaagttgaaatcgcgatgcagtggaatgattcctattctgaatctgttttcaca
tattgcaacaacatcaacacacatgaaggtggtactcaccttgttggtttccgtgccgct
ttgacccgtacgacgaatgcgtatgcgacggaaaagaatcttctgaaagatctgaaagcc
aaccttgagggtgaagacatccgtgaaggtctggcagcagttatctctgtaaaggttcgt
gaaccacagtttgaaggtcagacaaaaacaaaactgggtaatgccgaagtaaaaggtatt
gttgaaaccctggtaaatgaaaaactggctgactggatggaccgcaatccatcagttgca
aaaaacatcatcatgaaatgcgtggaatccgcgcgtgcccgtgaagctgccagaaaagcc
cgtgatctgactcgtcgtaagacggttttggatggcggttccctgccaggcaaaatggcg
gactgtcaggaacgtgacccggctctttgtgaactgtacctggtggagggtgactccgca
ggtggttccgcgaagcagggacgcgatcgtcgtacccaggcgattttgccgttgaaaggt
aaaatcctgaacgtcgaaaaagcgcgttttgacaaaatcatttcctctgaagagatcaaa
gtcatcatctctgcattgggtaccggtatcggtaaagacaacgtgaacgtggataaaatc
cgctatcacaaaatcatcatcatgaccgatgccgacgtcgatggatcccacatcatgact
ttgcttttgacgttcttctatcgtcagatgcctttggtgcttgagcgtggttatgtgtat
atcgcgcaaccaccgttgtaccgtgcgaaaaaaggcaaagaggaaacttacctgaaaaat
gaagcggctttgactgagtatcttctgagctcgggccttggtaatttcaaaatcaaaggc
aaggaatccctgccggaaaaagatctgcgtcagttgatcctgaacatccagcgcttcaat
gaccttctgcgtgtttcttccaagaaatacgacaaagatgtgctgtacttcctgctaagc
aaagtgactgattttgagaagaccttcacggatgcgaaaaaaatcgaacaggttcttacc
gacctgggtgcgtgggttaactctgatcagactttgggtatcaccgaatacaaaggcgaa
gttaagaccgaagctgaaaccggaaaaatgtatgctgacatctacactgttcgttacgca
gaccgcatgacaacaaaattcagcacagacaatctgcgttcttccgagatcatcgagctt
agaaaaatctgggccgatattcaggcgatcagcactttgcctttgacgattcttgaaggt
gaaaacgaagttcagtttgaaaactacaacgacttctacactcacgttatggaatccacg
aaaaaaggaatctacatccagcgctataaaggattgggagagatgaatccggagcagttg
tgggaaaccactctgaacaaggaaaacagaactcttctgaaagtgactatcgacgatgct
gttgccgccgacgaaaccttctctatcctgatgggtgagatggttgaacctcgtcgtcag
tttatccacgacaatgcattgcttgcacgcagcctggacgtttaa

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