KEGG T02356: Bdt

Bdellovibrio bacteriovorus Tiberius: Bdt_0560

Entry

Bdt_0560 CDS T02356

Gene name

ddlA

Definition

D-alanine--D-alanine ligase

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

bbat Bdellovibrio bacteriovorus Tiberius

Pathway

bbat00473	D-Alanine metabolism
bbat00550	Peptidoglycan biosynthesis
bbat01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:bbat00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:bbat00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp RimK CPSase_L_D2 ATP-grasp_3 GARS_A ATPgrasp_Ter

Other DBs

NCBI-GI:

426402564

NCBI-GeneID:

14046550

UniProt:

K7YRM6

Position

complement(571373..572464)

AA seq 363 aa
MKKIVALIFGGKSAEHEVSLRSAKNVADALDKDQFTPVLIGISKEGSWYRFPDMGVFTEA
TKIVDSALPSKAESVALMSLQGKPVLYSLKDQSKTAVDVAFPILHGTMGEDGTIQGLFKM
VQLPFVGCGVWSSAAGMDKEIMKRLLAVAKIPNARYLLLTPHQKNDYNEIVKQLGSPFFI
KPANAGSSVGVHKIKTAEDFVVKLKDAFQFDTKVLAEEFIQGREVECSVMGHNHAPKASL
PGEVIPQHEFYSYEAKYIDDNGALLKIPAELSPETTKAVQKMAEQTYQAMGCDGLTRVDF
FIRPNGDLYINEINTIPGFTKISMYPKMWEATGLSYKDLISQLIQLGFEKFEGEQSLKTS
YLD

NT seq 1092 nt +upstreamnt +downstreamnt
atgaaaaaaattgtggctttgatttttggtggtaaatctgcggagcatgaagtttctttg
cgttcagcgaagaatgtggctgatgctttggataaggatcagtttacgcccgtattgatt
ggcatcagcaaagaaggcagctggtatcgtttcccggatatgggtgttttcactgaggcg
accaagattgttgacagtgcccttccatccaaagcagaatcggtggctttgatgtccttg
caaggcaagccggttctttattctttgaaagatcagtctaaaacggcagtggatgtggcg
ttccctattctgcatggaaccatgggcgaagacggcacgatccagggtctgtttaagatg
gttcagcttccatttgtgggttgtggcgtgtggtcttcagcggccggcatggacaaagag
atcatgaagcgtcttttggcggtggcaaaaatcccgaatgcccgctatctgctgctgact
ccgcatcagaaaaatgattacaacgaaatcgtgaaacagctgggctccccgttctttatc
aaaccggccaatgcgggctcttctgtcggtgttcataagatcaaaacggctgaagacttt
gtggtgaaactgaaagacgccttccagttcgacaccaaagttctggctgaagaattcatc
cagggccgcgaagtggaatgttccgtcatgggtcacaaccatgcgccgaaagcctctttg
ccgggtgaggtgatcccgcagcacgaattctattcttatgaagccaagtacatcgatgac
aacggagccctgctgaaaatcccggccgagctttcaccggaaaccaccaaagccgtgcag
aaaatggcagaacaaacctatcaggccatgggctgtgatggtttgacccgtgtggacttc
ttcattcgcccgaatggggatttgtacatcaacgaaatcaacaccattcctggttttacc
aagatttcaatgtatccaaaaatgtgggaagcgacgggtttgagttataaagatttgatc
tctcagctaatccaattgggctttgaaaagttcgaaggcgagcaaagcctcaaaaccagc
tacttggattaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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