KEGG   Burkholderiales bacterium YL45: A4V04_07015
Entry
A4V04_07015       CDS       T04607                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bbay  Burkholderiales bacterium YL45
Pathway
bbay03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbay00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A4V04_07015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbay03021]
    A4V04_07015
   03019 Messenger RNA biogenesis [BR:bbay03019]
    A4V04_07015
Transcription machinery [BR:bbay03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     A4V04_07015
Messenger RNA biogenesis [BR:bbay03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     A4V04_07015
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_25 AAA Mor AAA_5
Other DBs
NCBI-ProteinID: ANU66195
Position
1541844..1543106
AA seq 420 aa
MHLSELKQKHVSELLDIALELDVENASRLRKQELMFAILKKRAKAGEQIFGDGTLEVLPD
GFGFLRSPVSSYLASPDDIYISPSQIRRFNLHTGDTVEGEVRTPKDGERYFALVKVDKVN
GLPPEELKHRILFENLTPLFPDEPLKLERDIRSEENLTGRIIDIIAPIGKGQRALLVASP
KSGKTVLMQHIAHAITANYPDVVLMVLLIDERPEEVTEMERSVKGEVIASTFDEPATRHV
QVAEMVIEKAKRLAESKKDVVILLDSITRLARAYNTVVPTSGKVLTGGVDANALQRPKRI
LGAARKLEEGGSLTIIATALNETGSRMDDVIYEEFKGTGNMEIHLDRNLSEKRVYPAINV
RKSGTRREELLLEPSVLQKTWILRKILYEMDEIQAMEFLVDRMKPTKNNAEFFEMMGRRG
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcatctttcagaactcaagcagaaacacgtttccgagctattagatattgctttggaa
ttagatgttgaaaatgccagccgtcttcgcaagcaagaattaatgtttgcaatcttgaaa
aaaagagcaaaggccggtgaacaaatttttggtgacggcaccttagaagttttacctgat
ggattcggttttttacgttctcccgtttcttcctatcttgccagccctgacgacatttac
atctctccttctcaaatccgccgcttcaatctccataccggcgacacagttgaaggtgaa
gtcagaactccaaaagacggagaacgctactttgcgttagttaaagttgataaggttaac
ggtcttcctccggaagaactcaagcacagaattcttttcgaaaatctgactccgttattc
cccgatgagcctctgaaacttgaaagagatattagaagcgaagaaaatctaaccggcaga
atcatcgacatcattgctccgattggtaaaggccagcgcgccctgttggttgcctcaccg
aagagcggtaaaacagttttgatgcagcacattgcacacgctattaccgccaactacccg
gatgttgttctgatggttcttctgattgatgaacgtccggaagaagttacggaaatggaa
cgttccgttaaaggtgaagttattgcgtccactttcgatgaacccgcaactcgtcatgtt
caagtggccgaaatggttattgaaaaagccaaacgcttggcagaaagcaaaaaagacgtt
gtcattcttcttgactctattacacgtctggccagagcctacaacaccgttgttccgact
tccggcaaggttttaacaggcggtgttgatgccaatgctcttcaaaggcccaaacgcatc
ctcggtgctgcccgtaaattagaagaaggcggttcgctcaccattattgctactgctctc
aacgaaaccggcagccgaatggatgacgttatttatgaagaatttaaaggtaccggcaac
atggaaatccatcttgaccgcaacctgtctgaaaaacgtgtttacccggctattaacgtc
cgtaagagcggtacacgccgtgaagaacttcttcttgaaccttccgttctgcagaaaact
tggatccttcgtaagattctttatgaaatggatgaaattcaggccatggaattcttggtt
gaccgtatgaaaccaactaagaacaatgccgagttctttgagatgatgggcagacgaggt
taa

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