KEGG   Bifidobacterium animalis subsp. lactis BB-12: BIF_00562
Entry
BIF_00562         CDS       T01840                                 
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
bbb  Bifidobacterium animalis subsp. lactis BB-12
Pathway
bbb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BIF_00562 (ruvC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbb03400]
    BIF_00562 (ruvC)
Enzymes [BR:bbb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     BIF_00562 (ruvC)
DNA repair and recombination proteins [BR:bbb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BIF_00562 (ruvC)
    RecFOR pathway proteins
     BIF_00562 (ruvC)
SSDB
Motif
Pfam: RuvC
Other DBs
NCBI-ProteinID: ADC85842
Position
complement(949843..950424)
AA seq 193 aa
MIVLGVDPGLTRCGVGVIEAGAYRRLSFIHVDVVRSDPHESQDLRLLKIYDGLCAKMDEF
IPDTVSIERVFAQENRNTVLGTAQAAGMAMLAAAQRGIPVALHTPTESKMAITGNGKAEK
IQMERMVARILNLNALPTPADAADALAIAICHALRPSGALEGGEREQHLTPAQRQWAQAT
QHATRRRGVRRGM
NT seq 582 nt   +upstreamnt  +downstreamnt
gtgatcgttctcggcgttgaccccgggctcacacgctgcggggtcggcgtgatcgaagcc
ggcgcataccgccggctttcgtttattcacgtcgatgtggtgcgaagtgatccgcacgaa
tcgcaggatctgagattgctcaagatctacgacggcctgtgtgcgaagatggacgaattc
attcccgacaccgtttcaatcgagcgtgtgttcgcccaagagaaccgaaacaccgtgctc
ggtacggcgcaagcggccggcatggccatgctggccgccgcccagcgcggtattccggtg
gcgcttcacacgccgaccgaatcgaaaatggcgatcaccggcaacggcaaggcggagaag
atccagatggagcgcatggtggctcggattctcaatctcaacgcattgcccacacccgcg
gatgccgcagacgccttggccatcgccatatgccatgcactgcgcccatccggtgcactt
gaaggcggcgaacgcgagcaacatctcaccccggcgcaacgccaatgggcacaggccacg
cagcatgccacccgtagaaggggagtccgcagaggcatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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