| Entry |
|
| Definition |
PAS domain-containing protein
|
| Orthology |
| two-component system, chemotaxis family, CheB/CheR fusion protein [EC: 2.1.1.80 3.1.1.61] |
|
| Organism |
|
| Pathway |
| Two-component system | | Bacterial chemotaxis |
|
| Class |
Environmental Information Processing; Signal transduction; Two-component system [PATH: bbd02020]
Cellular Processes; Cell motility; Bacterial chemotaxis [PATH: bbd02030]
 |
| SSDB |
    |
| Motif |
 |
| Other DBs |
NCBI-GI: NCBI-GeneID: UniProt: |
| Position |
complement(2782616..2787787)
 |
| AA seq |
1723 aa  
MKVDNRPTNNIPQKKVLKVIAIGASAGGLEALQDFLSHLPPIENVCLIIAQHLSPSHKSM
LVSLLTKETKLEVAEAIHGDKLESNKIYITPPDSEITIYKGKIILNKPSSAIGPKPSIDI
LLKSLSKDFKENVIAVILSGTGSDGAAGIFVVKENKGYVIAQEPHTAKYDGMPISAINTG
VVDAILSPDKIGEEILDYIINPNHEIQQSLEAEGTLNKIFQILSDRTGTDFTNYKPATIG
RRLNKRLANFHIDNLEDYLQILRNDPKEVDEMFNTILIGVTSFFRDRSAFLALEEQIKKI
IASKTKTDTIRIWTPGCSTGEEPYSIAITFDKILREKGLSIPVQIFATDIDDRSIDFARK
GIYSEEKISKLPKETLDTYFTPNVEGFTINKNIRGMILFSKHNLIKNPPFFKLDLISCRN
LLIYFDNYLQNHLIPLFHYSLLPKGFLFLGKSETVGQFEKLFQTLDGKNKIYQRKPGESL
RKSKLQSHPILKTNSQQLESKSNESLVTINDLIKETIFKTYEHPYVIVNDEFEVQEIHGD
IRLFLSLTSGKANLNLFKLLNSELQIEVRSILINTIKERKVTKSSIRRFTLFEKTYFVRI
IAKPLIFNHKIKDLFLVIFEQLDLEDYVSKGIVTNDSKNENQRVAELENELLATKEQVQT
YIEEIETSNEELQSLNEEMQSTNEELQSTNEELETSNEELQSTYEEVQIAYSELKSTHET
LELKERELLEKEYNLKALLNNSLQAFLLIDDAYAVIEWNQIANDLWNKLRKANIKKGETI
LDLISEENLENFIKQIREAFKGKTIKKQLKESSVDKIEYWFEYSITPVQDHTGQVKIISI
GLIDITEKIEVSAKLNKSEKLLTSVFNANGTGICITDSSGKFIEVNDEYCKIYGYSKEEL
LGQHFTKVVPSENREELEKLHDDFIFGKEEMSKEWIAKRKNGALIDIFASPRLLIYEDGS
RYKVTSVRDITENKKYKNILQKSSDSALVGGWEYDNITGVFALSEEAKNIFEIPKLTENL
YSFSSNMFKDEAKVILDKAMKDALEKGEAFDLEIQGHNTNDDSIWVRITCKPIVYNNKTL
KLFGTLQNITQQYFLLKEQKRTSDLLKRTEAISKVGSSEFNLLTKESVWSDEFYRICGLD
KDTHRASFDLRISLIHPDDKEYALKIYQDAIEKGGDYELEKRIITPEGIIKHIKSEGTVE
LNESGIPSRMIGVFKDITEQVRNEKIAKEKEQIFKNLFDNVSHLAVQGLDENGQVVYWNK
SSEKLYGYSEKEAVGEIISDLTALDNQKSNLMIELKSMIQTGQNLKSREEIHKKKDGSIV
PVFVNYTLIEIPNRPTQIFRFNIDISEAKSATDALIQSNLRYEIATKATSDTIWDWNLET
NTVIRAENFKTIFGHEIDKFSSNNKYWLQLIHPDDRRGISRSLNKFLDSDQELWESEFRL
IKSNGEYAIVLDKGILLRDSNNKPIRMIGATQDITARKNDEQELLNLSTQLIRRAKDLET
SNADLEQFAYVASHDLQEPLRMITGFLSQLQKKYEDILDEKGKKYIYFATDGATRMRQII
LDLLDFSRVGRIKENEQNIDINEILENILILNSRLIEEKEAQVSFESMPIVYAQKTPLQQ
IFQNIINNALKYQKPNQKPIIKIKAEDQGTNWLFSISDNGIGIEKEYLVKVFTIFQRLHT
KAEYEGTGLGLAICQKIVQNLGGKIWVESDIGKGSVFYFTIPK |
| NT seq |
5172 nt  +upstreamnt +downstreamnt
atgaaagtcgacaatcgtcccaccaataatatccctcaaaaaaaagtactgaaagtaata
gcaattggagcttctgcaggtggcttggaagctttacaggattttttgtcgcacctccct
cctattgaaaatgtttgtttgatcatcgctcagcatttgagtccttcacacaaaagcatg
cttgtgtctcttttgactaaagaaaccaaattagaagttgctgaagccattcatggagat
aaattagaaagcaataaaatatacattactccaccagatagtgaaattactatttacaag
gggaaaattattttaaataaaccttcttcagcaattggtccaaaaccttccattgatatc
ttgttaaagtctctatcaaaagactttaaagagaatgtaattgcagtcattttatctgga
acaggctctgatggagccgctggaatcttcgttgtaaaagaaaataaaggctatgtaatt
gctcaagaaccccatacagccaaatatgatgggatgcctatttcggctatcaacacaggt
gtagtagacgccatcctttcacctgataagatcggtgaagaaatactagattacatcatc
aatccaaatcatgaaatccagcaatcattagaggcagaaggaactttaaataaaattttt
caaatcctcagtgacagaacaggaaccgactttaccaattacaaacctgccactatcggt
agaagactcaacaaaagattagcaaatttccatatagataatttagaagattatctccag
atactaagaaatgaccctaaagaagtggacgaaatgtttaataccattttgataggggta
acttcattttttagggatcgatccgcttttctagcattggaagagcagatcaaaaaaatc
attgctagcaaaacgaaaactgacaccatcagaatttggacaccaggctgttccacaggt
gaagaaccttattcaattgccatcacatttgacaaaatccttcgtgaaaaagggctctct
atccctgttcaaatttttgctacagacatcgatgatcgctctattgactttgccagaaaa
ggaatttattcagaagaaaaaatatctaaacttcccaaagaaactcttgatacttacttc
actccaaatgtggaaggatttaccataaataaaaatatccgtggaatgatcttgttttcc
aaacataacctgatcaaaaacccaccttttttcaaattggatttaatttcttgtagaaat
ctcctgatctatttcgataattatttacaaaatcatcttattccccttttccactattcc
ctacttccaaaaggattcctatttttaggcaaatcagaaactgttggccaatttgaaaaa
ctctttcaaaccttggatggaaaaaacaaaatctatcaaagaaaacctggggaaagcttg
agaaaatcgaagttgcaatcccatcccattttaaaaaccaatagtcaacaactagaaagt
aaatcaaatgaatctctagtgacaattaatgacttgatcaaggaaaccatctttaaaacg
tatgaacatccttatgtgattgtcaatgatgaatttgaagttcaagagattcatggtgat
atccgactttttctcagccttacctctgggaaagcaaacctgaaccttttcaaattactc
aactcagaacttcagattgaggtaagatcaattttaataaatacaatcaaagaaagaaag
gttacaaaaagcagcataagaagatttacactttttgagaagacttattttgtaagaata
attgctaagcccttgatttttaatcataaaatcaaggatctctttcttgtgatttttgaa
cagttggacttagaagattatgtgtccaaaggtattgtcacaaatgatagtaaaaatgaa
aatcaacgtgtggctgaattggaaaatgaacttttggctacaaaagaacaagttcaaacc
tacatcgaagagatagaaacaagcaacgaagagctgcagtctctcaatgaagaaatgcaa
tcaaccaatgaagaactgcaatcgacaaatgaagaattggaaaccagcaatgaagaactg
caatctacttacgaggaagttcagattgcttactcagaattgaaatccacacatgaaacc
ttagaacttaaagaacgagaacttctcgaaaaagaatacaacctcaaagctttgttgaat
aattctcttcaagcatttttactaatcgatgatgcatacgctgtaattgaatggaatcaa
attgcgaatgacctttggaataagctgagaaaagcgaacataaagaaaggtgaaactatc
ctagaccttatttcagaagaaaacctcgaaaactttatcaagcaaattagagaagctttc
aaaggaaaaaccatcaaaaaacagctcaaagaatctagtgttgataaaatagaatattgg
tttgagtactcgattactcccgttcaagatcatactggacaagtaaagattatatctatt
ggactgatagacatcactgaaaaaattgaagtttcagcaaaactcaataaatctgaaaag
ctactcacctctgtatttaacgccaatggcacaggcatttgcattacagattcatcaggc
aaatttatcgaagtcaacgacgaatattgtaagatttatggttacagcaaagaggaatta
cttggacagcatttcacaaaagtagtcccatccgaaaatagagaagagctcgaaaaactt
catgacgactttatttttggcaaagaagaaatgagcaaagaatggattgcaaaaagaaag
aatggtgccttgatcgatatttttgcgagtccaaggctacttatttatgaagatggatct
cgctacaaagtaacatcagttagagatattactgaaaacaagaaatataaaaacatctta
caaaaatcatcagattctgcccttgttggtggatgggaatatgacaatattactggggtt
tttgcgctttcagaagaggccaaaaatatttttgaaatacccaaattgacagaaaatctt
tactcattttcttcaaatatgtttaaagatgaagcaaaagtcatcttagacaaagccatg
aaagatgctctagaaaaaggtgaagcttttgatctggaaatacaaggacataataccaat
gacgattccatttgggtaagaatcacctgtaaacctatagtttacaataataaaacattg
aaattatttggtacacttcaaaacataactcagcagtattttctacttaaagaacaaaaa
agaacctcagatctacttaaaagaactgaagccatatctaaagtgggaagctcagagttc
aacctcctcaccaaagagtcggtttggtccgatgaattttatagaatttgtggattagat
aaagatacccatcgagcttcatttgacttgcgaataagcctaattcaccctgatgacaaa
gagtatgcactcaaaatctatcaagatgcaatagaaaaaggaggagattatgaattagaa
aaaagaatcatcactccagaaggaatcatcaaacatataaaatctgaaggaactgttgag
ctaaatgaaagtggaataccaagccgaatgatcggggtatttaaagacattaccgaacaa
gttaggaatgaaaaaattgctaaagaaaaagaacaaatcttcaaaaacctctttgataat
gtcagtcatttggccgtacaaggtttagatgaaaatggtcaagtagtatattggaacaag
tcaagtgaaaagctttatggctacagcgaaaaagaagctgtaggagaaatcatctcagac
cttacggctttggataatcaaaagtcaaatttgatgattgaattaaaaagcatgattcaa
actggccaaaacctcaagtcaagagaagaaattcataagaaaaaagatgggtcgattgtg
cctgtatttgtgaattacacattgatcgagattccaaatagaccaacccaaatttttaga
ttcaacatagatatctcagaggctaaatcagcaactgatgctttaatacaaagtaattta
agatatgaaatcgctacaaaagcaacttctgataccatatgggattggaatttagaaact
aacacggtcatcagagcggaaaacttcaaaaccatcttcgggcatgaaattgacaagttt
tcttccaacaataagtattggcttcaactcattcatccagatgatagaaggggcatttct
agaagtttaaacaagtttcttgacagtgaccaagagctttgggaatctgaatttagatta
ataaaaagcaatggtgagtatgctatcgttctagataaagggatattattaagagatagt
aacaataagccaattcgaatgatcggtgctacacaagatatcaccgcaagaaaaaatgat
gaacaagagctcctcaacctaagcactcaactcattcgaagagcaaaagacttggaaacc
tctaatgctgacttagagcaatttgcttatgtcgcttctcatgatttgcaagaacctctg
aggatgataaccggattcctttctcaacttcaaaaaaaatatgaagatattttagatgaa
aaagggaaaaagtacatctactttgcaactgatggtgccactaggatgaggcaaatcatc
ttggatctattagatttttcaagagtgggaagaatcaaagaaaatgaacaaaatattgac
atcaacgaaatcctagaaaatattctaatcctcaatagccgactgattgaagaaaaagaa
gctcaggtaagttttgaatccatgccaatagtttatgctcaaaaaactcctttgcaacaa
atctttcaaaacatcatcaataatgctctgaaatatcaaaagccaaatcaaaaacctata
atcaaaatcaaagctgaagatcaaggaacgaattggcttttttcaatttcggataatggg
ataggaatcgaaaaggaatatctagtaaaagtcttcacaatcttccaaagactgcatacc
aaagcagaatatgaaggaacaggattaggtctagcgatctgccaaaaaatagtacaaaat
ttaggtggaaaaatatgggtcgaatcagatataggtaagggaagtgttttttattttact
atacctaaatag |