KEGG   Salisediminibacterium beveridgei: BBEV_3342
Entry
BBEV_3342         CDS       T05114                                 
Symbol
holB
Name
(GenBank) DNA polymerase III delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
bbev  Salisediminibacterium beveridgei
Pathway
bbev03030  DNA replication
bbev03430  Mismatch repair
bbev03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbev00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BBEV_3342 (holB)
   03430 Mismatch repair
    BBEV_3342 (holB)
   03440 Homologous recombination
    BBEV_3342 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbev03032]
    BBEV_3342 (holB)
   03400 DNA repair and recombination proteins [BR:bbev03400]
    BBEV_3342 (holB)
Enzymes [BR:bbev01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BBEV_3342 (holB)
DNA replication proteins [BR:bbev03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BBEV_3342 (holB)
DNA repair and recombination proteins [BR:bbev03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BBEV_3342 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C AAA TIP49
Other DBs
NCBI-ProteinID: AOM84639
UniProt: A0A1D7R059
Position
complement(3537061..3538053)
AA seq 330 aa
MGLDWTEAKQRQPRASAILARTIEKDRLAHAYLFEGSRGTGKMAIAELMAQVFLCRQRTG
IEPCNECADCKRVTSGNHPDVHVIEAQGAVIKVDQIRGLKKEFSMRGMESGKKVYLVKDA
DRMNASAGNSLLKFLEEPDGEALAILTTTRPQGMLKTILSRVQVMSFQPLSPDVFVKSLV
EHGVKEQDALLLSRMTANLDEALALTEEDWIAEARKKVIQLLDDLVTRPGYSLISLQDDW
VPFFKEKPDVQLGIDLLILWYRDLLRLKVDQPEELVYVDQEDRLWKQAVNLTEERLANHL
QAVVDTKRRIDANTSPQLAMEQMLIRLQEG
NT seq 993 nt   +upstreamnt  +downstreamnt
atgggtttggactggaccgaagcaaaacagagacaaccccgggcctcagccatattggca
cggacgatcgaaaaagaccggcttgcgcacgcctatttgtttgaaggcagcagaggaacg
gggaagatggccatcgcagagctgatggcacaggttttcctatgccggcaaaggacaggg
attgaaccttgtaacgagtgcgcagattgtaaacgggtgacatcagggaaccatccggat
gtccacgtgattgaagcacaaggagccgttatcaaagtagatcagatccgcggcttgaaa
aaagagttcagtatgcggggcatggaatccgggaaaaaggtatatctcgtaaaagatgcg
gaccggatgaacgcatctgccggaaacagcctgctgaaatttctcgaggaaccagacggg
gaagcgctggcaattctgacaacgacgcgaccgcaagggatgttgaagacgattctttcc
cgggtacaggtaatgagttttcagccactgagtccggacgtgtttgtgaagagtctcgtt
gagcacggtgtaaaagaacaagatgccctgttgctgtcaagaatgaccgccaatctcgat
gaagcactcgcactgacagaagaagattggattgcggaagcaagaaaaaaagtgatacaa
ttactagatgatcttgtgacaagacccggctattccctgatctccttacaggatgattgg
gtgccttttttcaaagagaaaccggatgtgcagctgggcatcgatctgttgatactctgg
tatcgggatctcctcagattgaaggtggatcaaccggaagaacttgtttacgtggatcag
gaggaccggctgtggaaacaggcggtgaacctcaccgaagagcgcttggcaaatcatctt
caggcagtggtggatacaaagcggcggattgacgccaacaccagcccgcagctggcgatg
gagcagatgctcattcggttacaggagggataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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