KEGG   Bifidobacterium bifidum BGN4: BBB_1424
Entry
BBB_1424          CDS       T02135                                 
Symbol
dacB
Name
(GenBank) D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
bbf  Bifidobacterium bifidum BGN4
Pathway
bbf00550  Peptidoglycan biosynthesis
bbf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bbf00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BBB_1424 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bbf01002]
    BBB_1424 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bbf01011]
    BBB_1424 (dacB)
Enzymes [BR:bbf01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     BBB_1424 (dacB)
Peptidases and inhibitors [BR:bbf01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   BBB_1424 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:bbf01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   BBB_1424 (dacB)
SSDB
Motif
Pfam: Peptidase_S13 DAHL
Other DBs
NCBI-ProteinID: AFL05015
UniProt: I3WJF2
Position
complement(1695282..1696745)
AA seq 487 aa
MASKAAARHHMIRHLPMTRRTVTVAVSAVIAVAVMAGYFVADIYDVAPGILTLRGVDRVA
IPDPQDALTGGTVAAGVDASMPVDAQGAKTILDEFSASEGVGKSFSLAIADGKGNIVAEH
DATIPRQPASTLKTLTAFAAATTLDMGSTLDTKTYLIQGDDNRKTVVLQGEGDMLLSDGE
SDPSHINGHAGLGTLAQRTAEALKQRGITQVDLLYDDSLFGQDRTPAGVTENNAEHRYYT
AISTMAVDGGRTWTDMVKPANPDDSSQYPVLSQQPVLDAATTFAKRLADNGITVTSGPTA
GAAPSGTSALASVSSAPLNEVMAFMLRHSDNTLAQLFGRLTALKRQAGNSIKTDTQAVAD
TLAEQGIDTSGLQMADCSGLTPGSKVSVTTLIEVQERNLTAGIATAAAEGLSIPGLVGTA
RNRIVTGPDNGLFRVKTGSLDAVTSLAGNVSRVKGGVLSFAVIVNDPENQWSAIEAINVM
AAKLAKL
NT seq 1464 nt   +upstreamnt  +downstreamnt
gtggcatcaaaggctgcggcccgacatcatatgattcggcatctgccgatgacgcggcgt
accgtcaccgtcgcggtgtccgccgtcatcgccgtcgcggtgatggcggggtatttcgtg
gctgacatctatgacgtggcacccggcatcctgacgttgcggggagtggaccgcgtcgcg
attcccgacccgcaggacgcgctcacgggcggcacggtcgccgccggcgtcgacgcgtcc
atgcccgtcgacgcccagggcgcgaagaccatcctcgacgagttctccgccagcgagggc
gtgggcaaatccttctcgctggccatcgcggacggcaagggcaacatcgtagccgagcat
gacgccacgattccccgccagcccgcatcgaccctgaagacactgaccgcgttcgcggcg
gcgaccacgctggacatgggctccacgctcgacaccaagacctatctcatccagggcgac
gacaaccgcaagaccgtggtgctgcagggtgagggcgacatgctgctgtcggacggggag
agcgatccctcgcacatcaacggccatgccgggctgggcacgctggcgcagcgcaccgcc
gaggcgttgaagcagcgcggcatcacgcaggtcgacctgctgtacgacgattcgctgttc
gggcaggatcgtacgccggctggcgtcacggaaaacaacgcggagcaccggtactatacg
gcgatctccacgatggccgtcgacggcggacgcacctggaccgacatggtcaagccggcc
aatcccgacgattccagccaatacccggtgctgtcccagcagcctgtgctggacgcggcg
acgaccttcgcgaagcggctcgccgacaacggcatcaccgtgacgtccgggccgaccgcg
ggcgcggcgccaagcggcacttcagcgctggcctcggtcagctcggcgccgcttaacgag
gtcatggcgttcatgctgaggcattccgacaatacgctagcccagctattcggccgtctg
acggcgctcaagcgtcaggccggcaacagcatcaagaccgacacgcaggccgtcgccgac
acgctcgccgagcagggcatcgacacgtccggcctgcagatggccgactgttccggtctg
acgccaggatcgaaggtcagcgtgaccacgctgatcgaggtgcaggagcgcaatctcacc
gccggcatcgccaccgcggcggcggagggactgtccatccccggcctggtcggcacggcg
aggaaccgtatcgtcaccggcccggacaacggcctgttccgcgtgaagaccggcagcctc
gacgccgtgacctcgctcgccggcaacgtgtcccgcgtcaagggcggcgtgctgtcgttc
gccgtgatcgtcaacgacccggagaaccagtggtcggccatcgaggcgatcaacgtgatg
gccgccaaactggccaagctgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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