KEGG   Borreliella burgdorferi JD1: BbuJD1_0254
Entry
BbuJD1_0254       CDS       T02081                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bbj  Borreliella burgdorferi JD1
Pathway
bbj03410  Base excision repair
bbj03430  Mismatch repair
bbj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BbuJD1_0254 (recJ)
   03430 Mismatch repair
    BbuJD1_0254 (recJ)
   03440 Homologous recombination
    BbuJD1_0254 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbj03400]
    BbuJD1_0254 (recJ)
DNA repair and recombination proteins [BR:bbj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BbuJD1_0254 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BbuJD1_0254 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BbuJD1_0254 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB Toprim_2
Other DBs
NCBI-ProteinID: ADQ30959
Position
263700..265826
AA seq 708 aa
MKIWKQKETNIQAQELTRIAKQYNINTFEATLLINREIKEEDFMFFLEDSVNLLHNPFLL
KNIDKFIKRINKAIKNNENILIFGDKDADGITATIIMYETLKDFGLNVSYKIPSNGEFYG
LSNELINTALEKKISLIITVDNGISSIEEINYANSKGIEIIITDHHLPGENFKTENIVIN
PHLKDDKYPFKEIAGCCVSFKACLALSMSFTDLYSKNLVFLFLEKTKNEIILHAIEINNY
ILKQYLRLNNKNDPLINSNKLEKFVQNKCIIIFNKEDQNELLNKHFAKSININTIDISEN
FIKKYPNFIKKTLTDLIQATKYFKYKEVEIKDKLYYIFYNVIFETNKNLLQKCLKRLSFV
AIGTIADNMPIINENRIILKVGLKEIALRERMSINYLLKDANILTKPNITSTDIAYKIAP
ILNSTGRLEKADIAINFLLTNDINQIENKFKEIKEINELRKYKEEKAWNSHNKNTIFKND
KFIVCYDNNTPKGISSRIATRLSSYYQKVAIFLTKQDNIIKGSIRSNNKINSKTLISIIP
SHLVINSGGHKAAAGFTLHENLLEDFIKELEYATTKVEYETTNENESIPIDAILPKNLTK
DSLFKTIEIFEPYGYEFREPILLMKNAYLQELKIIDKNHSSKHINMRIKSQNDYYKAIFF
NGTKKIEELDIKEDQYLDIIFTVNEDFYYPREKILKIIDIKKNAQINV
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgaaaatttggaaacaaaaagaaactaatatacaggcccaagaattaactcgcattgct
aagcaatataatatcaatacctttgaggcaactttacttataaatcgagaaatcaaagaa
gaagattttatgtttttccttgaagacagcgtaaatttattacacaacccatttttatta
aaaaatatagataaatttataaaaagaattaataaagcaatcaaaaataatgaaaacata
ttaatctttggagataaagatgctgatggaatcacagcaacaataataatgtacgaaact
cttaaagattttggacttaatgtgagctataaaataccttcaaatggagagttttatgga
ctttcaaacgaattaatcaacacagctttagaaaaaaaaatctctttaataataactgtt
gataatggtatttctagcattgaagaaataaattatgcaaattcaaaaggaatagaaata
ataataacagaccatcatcttccaggcgaaaattttaaaactgaaaacatagttataaat
cctcacctaaaagatgacaaatatccattcaaagaaatagcaggatgttgtgtaagcttt
aaagcttgccttgctcttagtatgtcctttacagacctttattctaaaaaccttgtattt
ttgtttttagaaaaaacaaaaaatgaaattattcttcacgcaatagaaataaacaactac
attctaaaacaatatctaagattaaataataaaaatgatcccctaattaactcaaacaaa
ctagaaaaatttgtacaaaacaaatgtataataatctttaacaaagaagatcaaaatgaa
ttattaaataaacactttgcaaaaagcataaacataaacacaattgatattagtgaaaat
tttataaaaaaatacccaaactttataaaaaaaacattaacagacttaatccaagcaacc
aaatatttcaaatacaaagaagttgagattaaagacaagctttactacatattttacaac
gtaatttttgaaactaacaaaaatttgctccaaaaatgcctaaaaagacttagttttgtt
gcaataggaacaatagcagacaatatgcccattattaatgaaaacagaataatcctaaaa
gtaggacttaaagaaatcgcactaagagagagaatgtctattaattatctattaaaagat
gcaaacatattaacaaaaccaaatataacttcaacagatattgcatataaaattgcacca
atactaaactcaacgggaaggcttgaaaaagcagatattgcaataaattttttactaact
aatgacattaatcaaatagaaaacaaatttaaagaaataaaagaaatcaacgaactgaga
aaatacaaagaagaaaaagcttggaattcgcataataaaaatactatttttaaaaatgat
aaattcatagtttgctatgataacaatactccaaaaggaataagttctagaattgcaact
agactttcttcttactaccaaaaagttgctatttttttaacaaagcaagataacattatt
aaaggatcaattagatcaaacaataaaatcaattcaaaaacactaatatcaataatacct
tcccatttagtaataaattcggggggccataaagctgcagctggatttacgctgcatgaa
aatttactcgaagactttattaaagaattagaatatgcaactacaaaagttgaatatgaa
actactaatgaaaacgaatcaataccaatagatgctattcttccaaaaaatttaacaaaa
gattctcttttcaaaacaatagaaatatttgaaccttatggctatgaatttagagagcca
atattattaatgaaaaatgcttaccttcaagaactcaaaataattgacaaaaatcatagc
tcaaaacatataaatatgcgaattaaatcacaaaacgattattataaagctatttttttt
aacggaacaaaaaaaatagaagaattggatataaaagaagatcaatatttagacatcatt
tttacagttaatgaagatttttattatcctagagaaaaaattttgaaaatcatagacata
aaaaagaatgctcaaatcaatgtatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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