KEGG T01340: BBPR

Bifidobacterium bifidum PRL2010: BBPR_1438

Entry

BBPR_1438 CDS T01340

Definition

lacto-N-biosidase (EC:3.2.1.52)

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

bbp Bifidobacterium bifidum PRL2010

Pathway

bbp00511	Other glycan degradation
bbp00520	Amino sugar and nucleotide sugar metabolism
bbp01100	Metabolic pathways
bbp01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:bbp00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:bbp00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 Glyco_hydro_20b Big_2 F5_F8_type_C RicinB_lectin_2 Glyco_hydro_67N BiPBP_C Qn_am_d_aIII

Other DBs

NCBI-GI:

311064784

NCBI-GeneID:

9889561

UniProt:

E4NYE5

Structure

PDB:

4JAW 4H04

Position

complement(1692623..1695949)

AA seq 1108 aa
MEKSSNRRFGVRTVAAIVAGLMVGGMCTAMTASAADDSAAGYSATAPVNLTRPATVPSMD
GWTDGTGAWTLGEGTRVVSSDALAARAQSLASELTKFTDVDIKAATGSATGKDISLTLDA
SKKAELGDEGFKLNIGSKGLEVIGATDIGVFYGTRSVSQMLRQGQLTLPAGTVATKPKYK
ERGATLCACQINISTDWIDRFLSDMADLRLNYVLLEMKLKPEEDNTKKAATWSYYTRDDV
KKFVKKANNYGIDVIPEINSPGHMNVWLENYPEYQLADNSGRKDPNKLDISNPEAVKFYK
TLIDEYDGVFTTKYWHMGADEYMIGTSFDNYSKLKTFAEKQYGAGATPNDAFTGFINDID
KYVKAKGKQLRIWNDGIVNTKNVSLNKDIVIEYWYGAGRKPQELVQDGYTLMNATQALYW
SRSAQVYKVNAARLYNNNWNVGTFDGGRQIDKNYDKLTGAKVSIWPDSSIYQTENEVEKE
IFDGMRFISQMTWSDSRPWATWNDMKADIDKIGYPLDIREYDYTPVDAGIYDIPQLKSIS
KGPWELITTPDGYYQMKDTVSGKCLALFTGSKHLDVVTQVGATPELRNCADVSVGQDQRD
TANERNTQKWQIRADKDGKYTISPALTQQRLAIATGNEQNIDLETHRPAAGTVAQFPADL
VSDNALFTLTGHMGMSATVDSKTVNPASPSKITVKVRAASNANTGDVTVTPVVPEGWEIK
PGSVSLKSIPAGKAAIAYFNVVNTTGTGDATVQFKLTNTKTGEELGTTSVALTGSLTKDV
EASDYAASSQETTGEHAPVGNAFDKNANTFWHSKYSNPSANLPHWLAFKASPGEGNKIAA
ITHLYRQDKLNGPAKNVAVYVVAASDANSVADVTNWGEPVATAEFPYTKELQTIALPNTI
PSGDVYVKFQINDAWGLTETSAGVTWAAVAELAATAKATPVELTEPEQPKDNPEVTETPE
ATGVTVSGDGVANGALSLKKGTTAQLTAKVAPDDADQAVTWASSDDKVVTVDKTGKVTAV
AKGVAKVTATTANGKSASVTVTVTEDSEVPGPTGPTEPTKPGTEKPTTKPNDGKLSATGA
DTAVLATIAALFALAGGAVVTVRRRSVR

NT seq 3327 nt +upstreamnt +downstreamnt
atggagaaaagctccaatagacgtttcggtgtgcgtaccgttgcggccattgtagccggc
ctgatggtcggtggcatgtgcaccgcgatgacggccagcgccgccgacgatagtgcagcc
gggtacagtgccacggctcccgtgaatctcacccgcccggccaccgtcccgagcatggac
ggctggaccgacggcaccggcgcatggacgctgggtgaaggcacccgcgtcgtgtcgagc
gatgcactggccgcgcgtgcgcagagcctggcatccgagctgaccaagttcaccgacgtg
gacatcaaggccgcgaccggttcagcgacgggcaaagacatctcgctcacgttggatgca
tcgaagaaggccgaactgggtgatgagggattcaagctgaacatcggctcgaagggcctt
gaggtcatcggcgcgaccgacatcggcgtgttctacggcacccgttccgtctcgcagatg
cttcgccagggccagctgaccctgcccgccggcacggtcgccacgaagccgaagtacaag
gagcgcggcgctacgctgtgcgcctgccagatcaacatctccactgactggatcgaccgt
ttcctgtcggacatggccgacctgcgcctcaactacgtgctgctggagatgaagctcaag
ccggaagaggacaacaccaagaaggccgccacatggtcgtactacacgcgcgacgacgtc
aagaagttcgtcaagaaggcgaataactacggcatcgacgtgattccggagattaactcc
ccgggccacatgaacgtctggctggagaactacccggagtaccagcttgccgacaactca
ggccggaaggatcccaacaagctcgacatctccaacccggaggccgtgaagttctacaag
acgctgattgacgaatacgacggcgtattcaccacgaaatactggcacatgggcgccgac
gagtacatgatcggcaccagcttcgacaactacagcaagttgaagacgttcgccgaaaag
cagtacggagccggcgcgacaccgaatgatgcgttcaccggcttcatcaatgacatagat
aaatacgtcaaggccaagggcaagcagctgcgcatctggaacgacggcatcgtcaacacc
aagaacgtctccctgaacaaggacatcgtcatcgaatactggtatggtgccggccgcaag
ccgcaggagctcgtccaggacggatacacgttgatgaacgcgacccaggccctgtactgg
tcccgttcggcgcaagtgtacaaggtcaacgccgcaagactgtacaacaacaactggaac
gtcggaacctttgacggcggacgacagatcgacaagaactacgacaaactgaccggtgcg
aaggtgtccatctggcccgacagctcgatctaccagaccgagaacgaggtcgagaaggag
atcttcgacggcatgcgcttcatctcacagatgacctggtccgattcccgcccgtgggcg
acgtggaacgatatgaaggcggacatcgacaagatcggctacccgctggacatccgcgaa
tacgactacaccccggtcgatgccggcatctacgacatcccccagttgaagtcgatctcc
aaaggtccgtgggagctcatcaccacgcctgacggctactaccagatgaaggatacagtg
tccggaaagtgtcttgcgctcttcaccggaagcaagcatctcgatgtcgtcacccaggtc
ggcgcgacgccggaactgcgcaactgcgccgacgtgtccgtcggtcaggatcagcgcgac
accgccaatgagcgtaacacgcagaagtggcagatccgcgccgacaaggatggcaagtac
accatctccccggcgctgacgcagcagcgtctcgccatcgccaccggcaacgagcagaac
atcgatctggagacccatcgtcccgccgctggcaccgtcgctcagttcccggctgacctg
gtcagcgacaacgcgctgttcacgctcaccggccacatgggcatgtccgccaccgtggac
tccaagaccgtgaacccggcctccccgtccaagatcaccgtcaaggtgagggccgcatcc
aacgcgaacaccggtgacgtcaccgtcaccccggtcgtgccggaaggctgggagatcaag
cccggaagcgtcagcctcaagtcgattccggccggcaaggccgccatcgcctacttcaac
gtggtcaacaccactgggacgggcgacgccaccgtgcagttcaagctcaccaacaccaag
accggtgaagagctcggcaccaccagcgtggcgctgaccggcagcctgaccaaggacgtg
gaagcaagcgactacgcggcgagctctcaggagaccaccggcgagcatgctcccgtgggc
aacgccttcgacaagaacgcaaacacgttctggcacagcaagtactccaaccccagcgcc
aatcttccgcactggctggcgttcaaggcgtcgcccggcgagggcaacaagattgcggcc
atcacccacctgtaccgtcaggacaagctgaacggcccggccaagaacgtcgcagtgtac
gtggtggcggccagcgacgccaacagcgttgccgatgtcaccaactggggtgaacccgtc
gccacggctgagttcccgtacaccaaggaactgcagaccatcgcgctgccgaataccatt
ccgtccggtgacgtgtacgtcaagttccagatcaacgacgcatggggcctcaccgaaacc
agcgcaggcgtcacctgggcggctgtcgccgagctggctgcgacggccaaggccactccg
gtcgagctcaccgagcccgagcagccgaaggacaaccccgaggtgacggagactccggag
gctacgggtgtgaccgtttctggcgatggtgttgccaatggcgcgctgtcgctgaagaag
ggcaccaccgcgcagctgaccgcgaaggtcgcgccggatgacgcggaccaggcggtgacg
tgggcctccagcgatgacaaggtcgtgacggtcgacaagaccggcaaggtgaccgccgtc
gcgaagggcgtggcgaaggtgaccgcgaccacggcgaacggcaagtccgcctctgtgacc
gtcaccgtcaccgaggactctgaggtgcccggcccgactggcccgaccgagccgaccaaa
ccgggcacggagaagccgaccacgaagccgaacgacggcaagctcagcgccaccggcgcc
gacacggcggtgctcgccaccatcgcggctctgttcgcgctggccggcggtgcggttgtc
acggttcgtcgccgcagcgtccgctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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