KEGG B.bronchiseptica: BB4348

Bordetella bronchiseptica: BB4348

Entry

BB4348 CDS B.bronchiseptica

Gene name glyA

Definition serine hydroxymethyltransferase (EC:2.1.2.1)

Orthology K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]

Pathway bbr00260 Glycine, serine and threonine metabolism
bbr00460 Cyanoamino acid metabolism
bbr00670 One carbon pool by folate
bbr00680 Methane metabolism
bbr01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:bbr00680]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:bbr00260]
Metabolism; Metabolism of Other Amino Acids; Cyanoamino acid
metabolism [PATH:bbr00460]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:bbr00670]

SSDB

Motif Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 Cys_Met_Meta_PP
OKR_DC_1
PROSITE: SHMT

Other DBs NCBI-GI: 33603322
NCBI-GeneID: 2659781
GeneDB: BB4348
UniProt: Q7WFD2

Position complement(4629563..4630810)

AA seq 415 aa
MFNRNLTLDQVDPDVWAAIQKEDVRQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRLKQIFGAEAANVQPNSGSQANQGVYMAVLKPGDTVLGMS
LAEGGHLTHGASVNASGKLYNFVPYGLDADEVLDYAQVERLTKEHKPKLIVAGASAYALH
IDFERMARIAHDNGALFMVDIAHYAGLVAGGAYPNPVPHADFVTSTTHKSLRGPRGGVIM
MKAEFEKAVNSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFQDYAQQVVKNAKVLADTLV
KRGLRIVSGRTESHVMLVDLRPKGITGKEAEAVLGQAHITVNKNAIPNDPEKPFVTSGIR
LGTPAMTTRGFKEAEAELTANLIADVLDNPRDEANIAAVRARVNELTARLPVYGN

NT seq 1248 nt +upstreamnt +downstreamnt
atgttcaaccgcaacctgaccctcgaccaggtggatcccgacgtctgggccgccatccag
aaagaagacgtacgccaggaacagcacatcgagctgatcgcgtccgagaactacgccagc
ccggccgtgatgcaggcccagggcacgcaactgaccaacaagtatgcggaaggctacccg
ggcaagcgctactacggcggctgcgagtacgtcgacgtggtcgagcagctggccatcgac
cgcctgaagcagattttcggcgccgaggccgccaacgtgcagccgaactccggctcgcag
gccaaccagggcgtgtacatggcggtgctcaagccgggcgataccgtgctgggcatgagc
ctggccgaaggcggccacctgacgcacggcgcgtcggtcaacgcctcgggcaagctgtac
aacttcgtgccctacggcctggacgccgacgaggtgctggattacgcccaggtcgagcgg
ctgaccaaggaacacaagcccaagctgatcgtggccggcgcctccgcgtacgcgctgcac
atcgacttcgagcgcatggcgcgcatcgcccacgacaacggcgcgctgttcatggtggac
atcgcccactatgccggcctggtggccggcggcgcctatcccaacccggtgccgcacgcc
gatttcgtcacctccaccacgcacaagtcgctgcgcggcccgcgcggcggcgtcatcatg
atgaaggccgagttcgagaaggccgtcaattcggccatcttcccgggcatccagggcggc
ccgctgatgcacgtcatcgcggccaaggccgtggccttcaaggaagcgctgtcgcccgag
ttccaggattacgcccagcaggtcgtcaagaacgccaaggtgctggccgatacgctggtc
aagcgcggcctgcgcatcgtgtcgggcaggaccgaaagccacgtcatgctggtggacctg
cgtcccaagggcatcaccggcaaggaagcggaagcggtgctgggccaggcccacatcacg
gtcaacaagaacgccatccccaacgacccggaaaagcccttcgtgaccagcggcatccgc
ctgggcaccccggccatgaccacccgcggcttcaaggaggccgaggccgagctgaccgcc
aacctgatcgccgacgtgctggacaatccccgcgacgaggcgaacatcgccgcggtgcgc
gcgcgggtcaatgaactgaccgcccgcctgcccgtctacggcaactga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   GENEDB-BBR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (6)   
   PROSITE (1)   
All databases (23)

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