KEGG   Bordetella bronchiseptica RB50: BB4534
Entry
BB4534            CDS       T00141                                 
Name
(GenBank) putative endonuclease
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
bbr  Bordetella bronchiseptica RB50
Pathway
bbr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BB4534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbr03400]
    BB4534
Enzymes [BR:bbr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BB4534
DNA repair and recombination proteins [BR:bbr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BB4534
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: CAE34897
UniProt: A0A0H3LZQ8
Position
4831538..4832326
AA seq 262 aa
MLRITSLNLNGIRSAFRKGLQPWMTAHNADVLCLQEIKVSHDDLTDELRHPPGYTGHFHH
AEKKGYSGVGMYLRAGAERVVAGFDCEEFDAEGRILRADWKDLSVISAYLPSGSSGDERQ
QAKYRFLDQFGPWLDGLMAEHRKTGREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEER
AWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARAT
SIYKDERFSDHAPLTVDYDIAL
NT seq 789 nt   +upstreamnt  +downstreamnt
ttgctgcgtatcacctcgctcaacctcaacggtatccgttccgccttccgcaagggcctg
cagccctggatgaccgcccacaacgccgatgtactgtgcctgcaggagatcaaggtctcg
catgacgacctgaccgacgagctgcgccacccgcctggctatacgggtcacttccaccac
gccgagaaaaagggctacagcggcgtgggcatgtacctgcgcgccggcgccgaacgcgtg
gtggccggcttcgattgcgaggagttcgacgcggaaggccgcatcctgcgcgccgactgg
aaggatctgtcggtcatcagcgcctacctgccctcgggttcaagcggcgacgagcgccag
caggccaagtaccgcttcctggaccagttcggcccatggctggacggcctgatggccgag
cacaggaagaccggacgcgaattcgtcatctgcggcgactggaacatcgcccacaaggaa
atcgacctgaagaactggaagggcaaccagaagaactcgggcttcctgcccgaggagcgc
gcctggctgaccgaggtgttcgaccggcgcggcttcgtcgacgtcttccgcaagctggac
gagcgcgccgaccagtacacctggtggagcaatcgcggccaggcctgggccaagaacgta
gggtggcgcatcgactaccagatcgccaccccgggtatcgccgaacgcgcacgcgccact
tccatctacaaggacgagcggttttccgaccacgcgccgctgacggtggactacgacatc
gccctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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