KEGG   Bifidobacterium breve JCM 7019: B7019_0334
Entry
B7019_0334        CDS       T03121                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bbrc  Bifidobacterium breve JCM 7019
Pathway
bbrc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbrc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B7019_0334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbrc03019]
    B7019_0334
   03016 Transfer RNA biogenesis [BR:bbrc03016]
    B7019_0334
Enzymes [BR:bbrc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     B7019_0334
Messenger RNA biogenesis [BR:bbrc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     B7019_0334
Transfer RNA biogenesis [BR:bbrc03016]
 Prokaryotic type
  tRNA degradation factors
   B7019_0334
SSDB
Motif
Pfam: RNase_PH PNPase S1 KH_1 RNase_PH_C KH_2 PCB_OB DUF1773 S1_2
Other DBs
NCBI-ProteinID: AHJ18655
UniProt: W6EV05
Position
405286..407997
AA seq 903 aa
MEGPEIKAVEAVIDNGTFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVVENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAAGLEAAKPFIKV
ICEAQDELKKIAAKETKEFQLFPEYTDELYARIDDIAHKDLDEALSIAEKLPRQDRIHEI
KEHVREVLADEFTDMDDAEKDKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVEGQHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILAAALQQAKEARATILEVINECIDGPAEMSEFAPRIITTTVPVEKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAEKAKSIIDSIANPHVPEAGET
YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVVVQGVD
DRGKISLAIPGFEDQENNAGSRGGRGDRDDRRGSRGRDDRRGGGRGRHSDRDDRDFDDRD
DRPRRRRSDDFEDDYEDRPRRRRSDDRDFDRDDRDSRDDDRPRRRRSDDFEDDYEDRPRR
RRSDDRGDRDDRRGGSRGGRGRGSDRNPRYATDDNYDDYRADREERSERPRRRVRRDFDP
FED
NT seq 2712 nt   +upstreamnt  +downstreamnt
atggagggtcccgaaatcaaggccgttgaggccgtaatcgacaatggaacgtttggcaag
cgcacgctgcgcttcgagaccggccgcctggcacagcaggctgatggtgctgtggccgcc
tacctcgatgacgattccatgattctgtccaccaccaccgccggctccagcccgaaggag
aactacgacttcttcccgctgaccgtcgacgttgaagagaagatgtacgccgccggcaag
atcccgggctcgttcttccgccgtgaaggccgtccgagctccgaggccatcctcgcctgc
cgcatcatcgaccgtccgctgcgcccgctgtttccgcacacgctgcgcaacgaggtgcag
gtcgtcgagaccgtgctcgccgtgaaccctgatgacgcctacgacgtcatcgccctgaac
gccgcctccgcctccaccatgatttccggtctgccgttcgaaggcccggtctccggtgtg
cgtctggccctgatcgacggccagtgggtcgccttcccgcgctggagcgagcgtgagcgc
gccgtgttcgagattgtggtcgccggccgcgttgtcgagaacggtgacgtcgccatcgcc
atgatcgaggccggcgccggcaagaacgcctggcacctcatctacgacgagggccagacc
aagcctgatgaggaagtcgtggccgccggtcttgaggccgccaagccgttcatcaaggtg
atttgcgaggctcaggacgagctcaagaagatcgccgccaaggagaccaaggaattccag
ctcttcccggagtacaccgatgagctgtacgcccgcatcgacgatatcgctcacaaggat
ctggacgaggccctctccatcgccgagaagctgccgcgccaggaccgcatccacgagatc
aaggagcacgtgcgcgaggtgctcgcggacgagttcaccgatatggacgatgccgagaag
gacaaggaactcggtaacgccttcaaggagctgcagcgccagatcgtgcgtcgccgcatc
ctgaccgaggactaccgcatcgacggccgtggcctacgcgacatccgcaccctgtccgcc
gaggtggacattgtgcctcgcgtgcacggttccgccctgttccagcgtggcgagacccag
attctgggcgtcaccaccctgaacatgctcaagatggagcagcagatcgacgctctgtcc
ggtccgcagtccaagcgctacatgcacaactacgagatgccgccgtactccactggtgag
accggtcgcgtcggctccccgaagcgccgcgaaatcggccacggtgccctcgccgagaag
gctctcgtgccggtgctgccgagccgcgaagagttcccctacgccatccgccaggtctcc
gaggccatcggttccaacggttccacttccatgggttccgtctgcgcctccaccctgtcc
ctgcttgccgccggcgtgccgctgaaggctccggttgccggcatcgccatgggccttgtg
tccggcgatgttgagggccagcacatcttcaagaccctcaccgatatcctgggcgccgag
gatgccttcggtgacatggacttcaaggtggcgggtacttccgagttcatcactgccctg
cagctcgacaccaagctcgacggcatccccgccgatatcctggccgccgctctgcagcag
gccaaggaagctcgcgccacgattctcgaggtcattaacgaatgcatcgatggcccggct
gagatgagcgagttcgctccgcgcatcatcaccaccaccgttccggttgagaagatcggc
gaggtcatcggcccgaagggcaagatgatcaaccagattcaggaagacaccggtgctgag
atcgccattgaggatgacggtaccgtcttcatctcctccgaaggtggcgaggctgccgag
aaggccaagtccatcatcgactccatcgccaacccgcacgtgcctgaggccggcgagacc
tacaacggcaaggtcgtcaagaccacgagcttcggtgctttcgtgaacctcactcctggc
accgacggtctgctgcacatctcccagattcgcaacctggccaacggcgagcgtatcgac
gccgttgaggacgtgcttaaggaaggcgacaccgttgaggtcgtcgtgcagggcgttgac
gatcgcggcaagatttccctggccatccccggtttcgaggatcaggagaacaacgccggt
tcccgtggtggccgtggcgatcgtgatgatcgccgtggtagccgtggccgtgatgatcgc
cgtggcggtggccgtggccgtcactccgaccgtgacgatcgcgacttcgacgatcgcgac
gaccgtccgcgtcgccgtcgctccgacgatttcgaggatgactacgaggatcgtccgcgt
cgccgtcgttccgatgaccgcgacttcgaccgtgacgaccgcgattcccgcgatgatgat
cgtccgcgtcgccgtcgttccgacgatttcgaggatgactacgaggatcgtccgcgtcgc
cgtcgttccgatgaccgtggcgatcgtgatgaccgccgtggtggctcccgtggcggccgt
ggccgcggttccgaccgcaacccgcgctacgccaccgacgacaactacgacgactatcgc
gccgaccgcgaagagcgctccgagcgcccgcgccgccgcgttcgccgcgacttcgatccc
ttcgaggactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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