KEGG   Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_0004
Entry
BBBR_0004         CDS       T04525                                 
Name
(GenBank) recombination protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
bbrd  Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbrd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BBBR_0004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbrd03400]
    BBBR_0004
DNA repair and recombination proteins [BR:bbrd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BBBR_0004
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 SbcC_Walker_B AAA_27 SPOUT_MTase_2 AAA_29
Other DBs
NCBI-ProteinID: BAQ99042
UniProt: D4BLF3
Position
3192..4349
AA seq 385 aa
MHISRLALDHYRSWSQVVVDFVPGVNILVGKNGLGKTNLVEAVEVLSTGASHRASSMLPL
IERGQTTATIRANVVDDDGQSTTYEASIHARGANRARINSGTSLYLRDIIGRIPSVSFTP
EDQRLVSGDPGARRTLLNQAGALLEPGYMQSLHQFTRIGKQRATLLKQLGASANTGQPVD
AVLSGLEIWTGQFIEAGVELTRMRARVIDLLAEPFAALYAELTGNDDTVSLTYAPSFDEV
LMQDDPRLSISEHFQRIYPGEVARGVNLIGPQRDDLTLNLADMPAREFASNGEMWTMALA
LKMALFQVIRQRLGLKPIVILDDVFAQLDDNRRTQILDFARRQDQVLITVASEGDVPTHE
SDNVLDIAQLMPSAAQSGGGSETQS
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgcatatctcccgtcttgcactcgaccactaccgctcatggagccaggtagtggtcgat
ttcgtaccaggagtcaatatcctggtcggcaagaacggcttgggcaaaaccaatctggtg
gaggccgttgaagtgctctccaccggagctagtcatcgtgcctccagcatgctgccgctt
atcgaacgcggccaaaccactgccactattcgcgccaacgtagtagacgacgatgggcaa
agcaccacgtatgaggcatcgattcatgctcgcggcgcgaatcgggcacgcatcaattca
ggaacctcgctctatttacgcgatatcatcggccgcattcccagcgtttcgtttactcct
gaagaccagagattggtatcgggtgatcctggtgcccggcgaacgttgctcaaccaagcc
ggagccctgctggaacccggctatatgcagtcgttgcatcaattcacacgcatcggcaag
cagcgcgccacattgctgaagcagcttggcgccagcgcgaatactgggcaaccggtggat
gccgtattaagcggtttggaaatatggaccggacagtttatcgaagcaggtgtggaactg
acccgtatgcgtgcgagagtcatcgacttgctggctgagccgtttgccgcgctgtacgct
gagttgactggcaacgatgacaccgtcagcctgacgtatgcgccgtcatttgacgaagtg
ctgatgcaagacgatccacgattgagcatcagtgaacatttccagcgcatctaccctgga
gaagtggctcgaggcgtcaatcttatcggccctcaacgtgacgatttgaccctgaatctt
gctgatatgccagcccgcgaattcgcctcgaacggcgagatgtggaccatggcgctggcc
ttgaaaatggcgctattccaagtgatacgccagagattgggccttaagcccatcgttatc
cttgatgatgtgttcgcccagcttgacgacaaccgtcgtacccagattctggattttgcg
cgccggcaagatcaggtgcttatcaccgtggcgtcagaaggcgatgtgcccacgcatgaa
tcggacaatgtgcttgatattgcgcaattgatgccatccgccgcgcagtctgggggcggg
agcgagacacaatcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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