KEGG   Bifidobacterium breve 689b: B689b_1039
Entry
B689b_1039        CDS       T03119                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
bbrv  Bifidobacterium breve 689b
Brite
KEGG Orthology (KO) [BR:bbrv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bbrv03009]
    B689b_1039
Enzymes [BR:bbrv01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     B689b_1039
Ribosome biogenesis [BR:bbrv03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    B689b_1039
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2
Other DBs
NCBI-ProteinID: AHJ23061
Position
1246776..1247546
AA seq 256 aa
MPNAYSRARSAYDDSNAIRLQKLLAQAGFGSRRKCEDMITEGRVEVDGELVTELGTRVDP
HKQQVRVDGSRVRVNPNHVTLALNKPRKVLSAMDDPKGRYTLRDIVGDKYERIFHMGRLD
YDSEGLILMTNDGELSQHVMHPKYEVEKTYIATLEGRISGTVCRRLVTTGVQLDDGWIKL
DHCAIIDSSRDFTMVKVVLHSGKNRIVRRIFGSIGFPVKRLVRTQIGPIKLGELKPGSYR
VLSQAEVRSLSKEVGL
NT seq 771 nt   +upstreamnt  +downstreamnt
atgccaaacgcatattcccgcgccagaagcgcgtatgatgattccaatgccattcgactg
cagaagctgcttgctcaagcgggcttcggttcccgccgcaagtgtgaggatatgatcacc
gaaggtcgtgttgaggtcgatggcgaacttgttaccgaactcggcacccgcgtcgacccg
cataagcagcaggttcgcgtggatggttcccgagtccgggtcaacccaaatcacgttacc
ttggctctgaacaagccccgtaaggtgctttccgccatggatgacccgaaaggtcgctac
acgctgcgtgacattgtgggcgacaagtatgaacgcattttccacatgggccgtctggat
tacgattccgaaggccttattctcatgacaaatgacggcgaattgtcgcagcacgtcatg
caccccaagtacgaggtggaaaagacttatatcgccacgctggaaggccgcatctccggc
acggtgtgccgcaggctcgtgaccaccggtgtacagctcgatgatggatggattaagctc
gaccactgcgcgatcattgattcctcccgtgacttcaccatggtcaaagtggtgctgcat
tccggcaagaaccgtatcgtgcgtcgtatcttcggttccatcggcttcccggtcaagcgt
ctggtacgcacccaaatcggcccgatcaagcttggtgagttaaagcccggctcataccgc
gtgttgtctcaggccgaggttcgttcgctgtccaaggaggtcggactgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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