KEGG   Bradyrhizobium sp. BTAi1: BBta_0092Help
Entry
BBta_0092         CDS       T00528                                 
Gene name
ligC
Definition
ATP-dependent DNA ligase (EC:6.5.1.1)
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
bbt  Bradyrhizobium sp. BTAi1
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:bbt03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bbt03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bbt03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bbt03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
RhizoBase: 
UniProt: 
Position
99021..100034
Genome map
AA seq 337 aa AA seqDB search
MEARSVDAIPRGHEWQYEPKWDGFRCLLARHGADVTMQSKAGEDLARYFPEVAAAARALK
ATRFTLDGELVVPQAKSFSFDALLQRIHPAASRVKKLSVETPALFLAFDLLATAKDAELM
ARPLHARRLALEAFAKANFTDHPTFRLSPATTRFATAQDWLAQSGGGSDGVIAKRIDLPY
QAGNRDGMQKIKRHRSADCVIGGFRYATNKGAQGRKLVGSLLLGLYDDDGLLHHVGFTSA
LKKEEKPALTDKLEPLIAPPGFTGNAPGGPSRWSTARSTEWCPLKPKLVIEVCYDHFSGD
RFRHGTSILRWRPDKSPRQCTFEQLKQTIADPLKLLA
NT seq 1014 nt NT seq  +upstreamnt  +downstreamnt
atggaggcgcggtcggtggatgcgatcccgcgcgggcacgagtggcagtatgagccgaaa
tgggacggcttccgctgtcttctggcgcgccacggggctgacgtgacgatgcagtccaag
gcgggcgaagatctcgcacgctactttcccgaggtggccgccgccgcgcgggcactgaag
gccacgcgcttcacgcttgatggcgagctggtcgtgccgcaggcgaagtcgttctcgttc
gacgcgttgctgcagcggatccatccggccgcgagccgcgtgaagaagctatcggtggag
acgccggcgctgttcctcgccttcgacttgctggcgacggcgaaggatgcagagctgatg
gcccggccgctgcacgcaaggcggctcgcgctggaggcgttcgcgaaggcgaatttcacg
gatcatccgaccttccggctgtcgccggccaccacccgctttgcgaccgcgcaggactgg
ttggcgcagtcgggcggcggctcggacggcgtgatcgccaagcgcatcgacctgccctac
caggccggcaatcgcgacggcatgcagaagatcaagcgccatcgctcggccgattgcgtc
atcggcggcttccgctacgccaccaacaagggcgcccagggccgcaagctggtcggctcg
ctgctgctcgggctctacgatgatgacggcctgctgcatcacgtcggcttcacctccgcg
ctcaagaaggaggagaagcccgcattgacagacaaattagaaccgctgattgcgccgccc
ggcttcaccggcaatgcgccgggcgggccgagccgctggtcgaccgcgcgctcgacagaa
tggtgcccgctcaagccgaagctggtgatcgaggtctgctacgaccatttctccggcgat
cgcttccgccacggcacctcgatcctgcgctggcgtcccgacaaatcgccaaggcaatgt
acgttcgagcagctcaagcagacgatcgccgatcccttgaagctgctcgcgtga
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