KEGG T00528: BBta

Bradyrhizobium sp. BTAi1: BBta_0798

Entry

BBta_0798 CDS T00528

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bbt Bradyrhizobium sp. BTAi1

Pathway

bbt03410	Base excision repair
bbt03420	Nucleotide excision repair
bbt03430	Mismatch repair
bbt03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bbt03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bbt03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bbt03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bbt03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme DNA_ligase_A_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

RhizoBase:

UniProt:

Position

complement(816857..818803)

AA seq 648 aa
MNRFAELLDRLAYEPGRNNKLRLLTAYFREAEDPDRGYALGALTGALSFKHAKPALIRDL
IAARTDPVLFALSYDYVGDLSETVALMWPKGGAHQQQHVAGSPPPQPSPTRGEGAQLRVA
LAPGMPSAMGPTASTGRAASTAGTASNVAPTDILRSSAPALSIPSPLVGEGQGGGVPTGS
LPEALPPGAHAAGHNNPPPPTLTEVVTTLRTLGKTEMPRQLAQWLDELDETGRWALLKLV
TGALRIGISARLAKTAAAALGDKDPHEVELVWPGLSPPYLDLFAWLEGRGDKPVNSDPAP
FRPVMLAHAVEDDDFESMNAADYIAEWKWDGIRVQAVSGRDSDGCIVTRLYSRSGEDITP
SFPDLLPSLHLPGALDGELLVVREKRVQSFNVLQQRLNRKTVSPKLMKEYPIHLRAYDLL
SDEGSDLRERPFAERREQLEAFIRRLDDPRVDLSPTIAFASWDELKAARANPASAGAGDD
AEAVEGVMLKRRDAPYLPGRPKGQWWKWKHDPHIIDAVLMYAQRGHGKRSSYYSDYTFGV
WTAGEAGDQLVPVGKAYFGFTDEELLQIDRFVRRNTTEKFGPVRHVVHEPEQGLVLEVAF
EGLQRSPRHKSGIAMRFPRINRLRWDKPPRDADRLETLERLLKSETAG

NT seq 1947 nt +upstreamnt +downstreamnt
atgaaccgcttcgccgagctgctcgaccgcctcgcttatgagccgggccgcaacaacaag
ctgcgcctgctgaccgcatatttccgcgaggccgaggaccccgaccgcggctacgcgctg
ggcgcgctgaccggcgcattgtcgttcaagcacgccaagccggcgctgatccgcgacctc
atcgccgcccgcaccgacccggtgctgttcgcgctgtcgtatgattacgtcggtgacctc
tccgagaccgtcgcgctgatgtggccgaagggcggtgcgcatcagcagcagcatgtcgcg
gggtccccccctccccagccctcccccacaaggggggagggagcgcagttgcgcgtggcg
cttgcacctgggatgccatcggcaatgggaccaacggcatcgacaggacgtgcggcatcc
accgccggcacggcctcgaacgtggctccaacagacatcctccgttcctcagcgcccgcc
ctctccattccctccccccttgtgggggagggtcagggagggggtgtccccacgggcagt
ctcccggaagcgctcccaccaggagctcacgcagcaggacacaacaatccgccacccccg
acgctcaccgaggttgtcaccaccttgcgcacgctcggcaagaccgagatgccgcggcag
ctggcgcaatggctcgacgagctcgacgagaccggacgctgggcgctgctgaagctggtc
accggcgcacttcgcatcggcatctcggcacgtctcgccaagaccgcggcggccgcgctc
ggcgacaaggacccgcatgaggtcgagctggtctggccggggctgtcgccgccttatctc
gacctgttcgcctggctcgagggccgcggcgacaaacccgtcaacagcgatcccgcgccg
ttccggcccgtgatgctcgcgcatgccgtcgaagacgacgatttcgaaagcatgaatgcg
gccgactacatcgccgaatggaaatgggacggcatccgcgtgcaggcggtcagcggccgc
gacagcgacggatgcatcgtgacgcggctgtattcgcgcagcggcgaggacatcacaccg
agcttccctgatctgttgccatccctgcatctgcccggcgcgctcgacggcgagctgctg
gtggtgcgcgagaagcgcgtgcagagcttcaacgtgctgcagcagcggctgaaccgcaag
accgtgtcgccaaagctgatgaaggaatatccgatccatctgcgcgcctacgacctgctc
agcgacgaaggcagcgatctgcgcgagcggcccttcgccgaacggcgcgaacagctcgag
gcgttcatccggcggttggacgatccgcgcgtcgacctgtcgccgacgatcgccttcgcg
agctgggacgaactgaaagcggcgcgcgccaatcccgcatcggccggcgccggcgacgat
gccgaagcggtcgaaggcgtgatgttgaagcggcgcgacgcgccctatctgccgggccgg
cccaaaggacaatggtggaagtggaagcacgatccgcacatcatcgatgccgtgctgatg
tatgcgcagcgcggccacggcaagcgctcatcctactactccgactacacgttcggtgtg
tggacggcgggtgaagccggcgatcagctcgtccctgtcggcaaggcctatttcggcttc
accgacgaggaactgctgcagatcgatcgtttcgtccgccgcaacaccaccgagaagttc
ggccctgtccgccatgtcgtgcacgagcccgagcaggggctggtgctggaggttgccttc
gagggcctgcagcgctcgccgcggcataaatccggcatcgcgatgcgcttcccgcgcatc
aaccgcctgcgctgggacaagccgccgcgggatgccgaccggctggaaacgctggaacgc
ctgctgaaaagcgagacggcggggtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BBT (1)   
   OC (1)   
   RHIZOBASE-BBT (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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