KEGG   Bradyrhizobium sp. BTAi1: BBta_5046
Entry
BBta_5046         CDS       T00528                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bbt  Bradyrhizobium sp. BTAi1
Pathway
bbt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bbt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BBta_5046 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbt03021]
    BBta_5046 (rpoA)
   03400 DNA repair and recombination proteins [BR:bbt03400]
    BBta_5046 (rpoA)
Enzymes [BR:bbt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BBta_5046 (rpoA)
Transcription machinery [BR:bbt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BBta_5046 (rpoA)
DNA repair and recombination proteins [BR:bbt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BBta_5046 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF211 RNA_pol_L_2 IDH DUF4249
Other DBs
NCBI-ProteinID: ABQ37047
RhizoBase: BBta_5046
UniProt: A5ELK3
Position
complement(5275178..5276209)
AA seq 343 aa
MGETVTIQKNWQELIRPNKLQVTPGSDATRFATVVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGAVTA
GDIQTVGDIVVLNPDLQLCTLDEGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPIDSL
FSPVRKVSYKVENTREGQILDYDKLTMTIETNGAISPEDAVAYAARILQDQLNVFVNFEE
PRKEVAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgggtgaaacagtgacgatccagaagaattggcaagaattgattcggccgaacaagctc
caggtcacgccgggctccgacgcgacccgtttcgccaccgtggttgccgagccgctggag
cgcggtttcggccagacgctgggcaatgcgctccgccgcatcctgctgtcgtcgctgcag
ggcgccgcagtgcagtcggtgcacatcgatggcgtgctgcacgagttctcctcgatcgcg
ggcgtccgtgaggacgtcaccgacatcgtgctgaacatcaaggatatctcgatcaagatg
cagggcgagggcccgaagcggatggtcgtgaagaagcagggtccgggcgccgtcaccgcc
ggcgatatccagaccgtcggcgacatcgtcgtgctcaatcccgacctgcagctctgcacc
ctggacgagggcgccgagatccgcatggagttcacggtcgcgaccggcaagggctacgtg
ccggccgagcgcaaccgtcctgaggacgcgccgatcggcctgatcccgatcgacagcctg
ttctcgccggtccgcaaggtctcctacaaggtcgagaacacccgcgagggccagatcctc
gactacgacaagctgaccatgacgatcgagaccaacggcgcgatctcgccggaggacgcg
gtggcctacgccgctcgcatcctgcaggatcagctcaacgtcttcgtcaacttcgaagag
ccgcgcaaggaagttgcccaggagatcattccggatctcgccttcaatccggcgttcctc
aagaaggtggacgaactcgagctgtcggtgcgttcggcgaactgcctgaagaacgacaac
atcgtctatatcggcgacctcgtgcagaagtcggaagcggagatgctgcgcaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggctcagatgggtctgcatctc
ggcatggaagtgcctggctggccgccggagaatatcgacgaactggccaagcgcttcgag
gatcactactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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