KEGG B.burgdorferi: BB0388

Borrelia burgdorferi B31: BB0388

Entry

BB0388 CDS B.burgdorferi

Definition DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)

Orthology K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]

Pathway bbu00230 Purine metabolism
bbu00240 Pyrimidine metabolism
bbu01100 Metabolic pathways
bbu03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:bbu00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:bbu00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:bbu03020]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3
RNA_pol_Rpb1_4 Apocytochr_F_C PYNP_C

Other DBs NCBI-GI: 15594733
NCBI-GeneID: 1195225
JCVI-CMR: BB_0388
UniProt: O51349

Position complement(397544..401677)

AA seq 1377 aa
MKEIKDFERIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCERIFGTTKEWEC
YCGKFKSVRYKGIICDRCNVEVTHFKVRRERMGHIELAAPVAHIWYYKYIPSRIGLLLDI
TASSLNSILYYEKYVVIEPGDTDLKKMQLLNEDEYIEARERYGMSFNASMGAEAIKTLLE
NLDLDELSSKLRIQMIDKDDKTDKKLLRRLEIIENFKISGNKPEWMIMEVLPVIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPAK
MALELFKPFVIRRLIESEAVFNIKRAKNLIEQEVDEVWQILDLVIKEHPILLNRAPTLHR
LGIQAFEPVLVEGKAIKLHPLVCHAYNADFDGDQMAVHVPLTPAAQAESWALMLSTNNLL
NPANGHPIVFPSQDIVLGLYYLTMEKKNVVGEGKKFLNFNNVILAINNRSLDYNASIYVK
IHGEYKKTTAGRVIFNEALPKGIEFVNKTLSDLELQILISKVYVVHGSSIVIEMLDIIKE
LGFRYATKFGCTISMSDIIVPDEKRTYVERANKEIAKIQNDYAKGVITGEERYNNVVSVW
LKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQIRQLAGMRGLMAKTSGDIIEL
PIISNFKEGLSVIEFFISTNGARKGLADTALKTADAGYLTRRLVDIAQDVVVRIEDCGTI
NGIKVETVKNGEEILESLKEKAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGI
EKLVIRSVLTCEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKISLKNAFILNGIEGFNVRVDNGILFTRKGTLKIINVFYEEKIKNIKEI
KVLDSQRVIKGIPLFIDKKGSEILSSYIGYVKLRDDNFFIVSEEQEVSLKAGTKLEIEVG
DYVESGKVIGTFDPFAEPIIAEVKGKIKFKDIILGTTLKEEINTETGNVEKRITDNVFES
LDPRIFIIDSSGMEVASYVLPGDAYLQVEDGQSINIGDIIAKLSKGSEKTQDITGGLPRV
NDLFETRIPKNLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGD
VVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKHIGVIIKQMMK
KVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIEQGGEPAIASPILIGVTKTSLNIDSFISA
ASFQETTKVLTDASIAGKIDDLRGLKENVVIGHLIPTGTGMGLYKKIKVSENIDSEV

NT seq 4134 nt +upstreamnt +downstreamnt
atgaaagagataaaagattttgaaagaataaaaattaaaatagcgtctcccgatcaaatt
agaaattggtcttatggagaggttaaaaagtccgaaactattaattatagaactttaaga
cccgaaaaagatgggcttttttgtgaaaggatttttggtactacaaaggaatgggaatgt
tattgtggtaaatttaaatcggtcagatataaaggtattatttgtgatcgttgtaatgta
gaggttacccattttaaggttagacgtgaaagaatggggcatattgagctagcagcccca
gttgctcatatttggtattacaaatatataccctctaggattgggcttttgcttgatatt
acagcatctagtttgaattctattctttattatgaaaaatatgtagtaattgaaccgggc
gatactgatcttaaaaaaatgcagcttttaaatgaagatgagtacatagaagctagagag
cgatatggtatgtcttttaatgcttcaatgggggctgaggctattaaaactcttcttgaa
aatcttgatcttgatgagctttcgtctaagcttagaattcaaatgatagataaagatgat
aaaactgataagaaactcttaagacgtcttgaaattattgagaattttaaaatttctggc
aataagccagagtggatgattatggaagttcttcctgttattcccccagagattaggcca
atggttcagcttgatggggggcgctttgcaacatctgatcttaatgatctttatagaaga
gtcataaatagaaataatcgtttaagaaagttgcttcttcttaatgcgccagagattatt
gtgagaaacgaaaaaagaatgcttcaagaatcagtagactctctttttgacaattctcat
aaaagaaaggttgtcaaaggttcatctagtaggcctctcaagtcgctttccgatgcatta
aaaggtaagcagggaaggtttaggcaaaatcttcttggtaaaagagtagattattctggt
cgttctgttattgttgttggacctgagcttaagctacatcaatgtggattgcctgcaaaa
atggcccttgagctttttaagccttttgtgataagaagactgattgagagtgaagctgtt
tttaatatcaaaagagcaaagaatttaatagagcaagaagtagatgaggtgtggcaaatt
ttagatcttgttatcaaagagcatcctattcttttaaatagggcacccactcttcataga
cttggaattcaagcttttgaacctgtgttagttgagggtaaggcaataaaattacatcct
cttgtttgtcatgcatacaatgccgattttgatggtgatcaaatggcggtacatgtgcct
cttactccggcagcacaagctgaaagttgggctttaatgctttcaacaaataatctttta
aatcctgccaatgggcatcctattgtttttccatcccaagatattgttttgggcctatat
tatttaactatggaaaaaaagaatgttgttggagaaggtaaaaagtttttaaactttaac
aatgttattcttgccataaataataggagtctggattacaatgcttctatttatgtaaaa
attcatggtgagtacaaaaaaactacggccggtagggttatatttaatgaggctttgccc
aagggaattgaatttgtaaataaaacccttagtgatttggagctacaaattttaatatca
aaagtttatgtagttcatggttcttctatcgtaattgaaatgcttgacatcatcaaggaa
cttggttttaggtatgccactaagtttggatgcacaattagtatgagcgatattattgtt
cctgatgaaaaaagaacttatgtagaaagggccaataaagagattgctaagattcaaaat
gattatgctaaaggtgttattactggcgaagagcgttataacaatgtagtttctgtttgg
ttaaagaccaatgaagaacttactaataagatgatggaaattttaaagaaagatagagat
ggatttaatgttatatatatgatggcagattctggtgctaggggtagtaggaatcaaata
agacagcttgctggtatgagaggattgatggcaaaaacttctggggatattattgagctt
ccaattatttctaactttaaagaaggtctttctgtgatagagttttttatatctacaaat
ggagcaagaaaaggtctagcagatactgctcttaagaccgctgatgctggatatttaact
cgaagattagtagacattgctcaagatgttgttgttagaatagaggattgtggaactata
aatggaataaaagttgagactgtaaaaaatggtgaagaaatattagaatctttgaaagaa
aaagctgttgggagttattctattgaaagaataaaaaatccaattactggcgagattgtt
ttagatgcaaatgaagaaatctcagaagctaaaatagaattattagagaaaattggtatt
gaaaaacttgttattagatctgttttaacgtgtgaagctgagcatggcgtttgtcaaaaa
tgttatggtagagacttttctaagaacaaacctgttaatattggggaggctgtgggaata
attgctgctcagtccataggtcaaccgggtactcaattaaccatgagaacttttcatatt
ggtggagttgctcaggctggcagtgaggatgataaaatatctttaaagaatgccttcata
cttaatggcatagaaggttttaatgttagagttgataatggaattcttttcacaagaaaa
ggaactttaaaaataatcaatgttttttatgaggaaaaaattaagaacataaaagagatt
aaagttttagattctcaaagagtaataaaaggaattcctttgtttattgataaaaagggc
tcagagattctctcttcttacattggttatgttaaattaagagacgataattttttcata
gtgtcagaagagcaagaagtttccttgaaagcgggtacaaagcttgaaatagaggttggt
gattatgttgaatcaggcaaagttattggtacatttgatccatttgcagagcctattatt
gcagaggttaagggtaaaattaaatttaaggatattattttaggaactactcttaaagag
gaaataaatactgaaacaggcaatgttgaaaaaagaattacagataatgtttttgaatct
cttgatcctagaatttttattattgatagtagtggtatggaggttgcatcttatgtatta
ccaggtgatgcttatcttcaagttgaagatggccagagtattaacataggagatattatt
gcgaaactttctaaaggttctgaaaaaactcaagatattacagggggattgcctcgtgtt
aatgatctttttgagacaagaattcctaagaatttaactgaaatggctaaagtaagcgga
attgtacaatttaaatcaattcaaaaaggtaaaaggcttattaatattttagatgagtat
ggggttgaacataagcattatattccagctggaaaacatcttttggttagagatggagat
gttgtaaaagcaggagatatgctttgtgatggtagaattaatcctcatgatgtgcttgaa
attttaggtgggattagtttacaagaatttctgttggcagaaattcaggatgtttatcga
aaacagggtgttagcattaatgacaaacatattggtgtgataatcaagcaaatgatgaaa
aaagttaagattgttgcagttggtgatactaattttgtttatgggcaaaaggtagataag
cacactttttatgagcaaaatagaaaagtaatcgaacaaggtggtgagccagcaatagca
agtccaattcttataggagtaactaaaacgtctcttaatatagattcttttatttccgca
gcttctttccaggaaacaacaaaagtattaacagatgcttctattgctggaaaaatagat
gatcttaggggattaaaagaaaatgttgtaattggacatttaattcctactggaactggt
atgggtctttataaaaaaattaaagttagtgaaaatatcgattctgaagtttaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)

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