KEGG   Bdellovibrio bacteriovorus W: BDW_00280
Entry
BDW_00280         CDS       T03036                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bbw  Bdellovibrio bacteriovorus W
Pathway
bbw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BDW_00280 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbw03021]
    BDW_00280 (rho)
   03019 Messenger RNA biogenesis [BR:bbw03019]
    BDW_00280 (rho)
Transcription machinery [BR:bbw03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BDW_00280 (rho)
Messenger RNA biogenesis [BR:bbw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BDW_00280 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 AAA Spore_III_AA AAA_22 NACHT ATPase_2 ResIII
Other DBs
NCBI-ProteinID: AHI04566
Position
55787..57532
AA seq 581 aa
MSEPKDSQGVEVVKKRTRVKASPTAEETKAKSEDTGSSSAPSPAENNSPAAAASAPSPES
TPEAATAAAPTEQQQQNQRMDRPQRREFRPNNRDNRDNRDRNNGGRGGHRHDRNDSRRDF
RNDRHDKYRDEGQPQGDDGHSNPPVQTQEVDLADIQLTDEEKTWLSSKDLKSKNITQLTE
LATKLKIENAAGMRRQDMIFEILKRAAKLGQDIYGSGVLEILPDGYGFLRSPDYNYLPGP
DDIYVSPSQIRRFGLRTGDTVTGTVRPPKEGERYFALLKVDSLNFETTEKGKDKILFDNL
TPLYPNERLKLEHTPSDYTTRVVDLMAPLGKGQRALIVAPPRTGKTVLMQQIANAITTNH
PEVKLIVLLIDERPEEVTDMQRTVKGEVVSSTFDEPPTRHVQVAEMVIEKAKRLVEHKHD
VVILLDSITRLARAYNTVVPPSGKILSGGVDSNALHKPKRFFGAARNIEEGGSLTIIATA
LIDTGSRMDEVIFEEFKGTGNAEIHLDRKLMEKRIFPCMDINKSGTRKEDLLVEKADLNR
LWILRKVLAPMNVVDAMEFLLDKVENTKTNADFLKAMSGPT
NT seq 1746 nt   +upstreamnt  +downstreamnt
ttgtctgaacctaaagattcacaaggcgtagaagtcgttaaaaaacgcacgcgagttaaa
gcgagtccaacggcagaagagactaaagccaaaagcgaagacactggcagctcatcagcc
ccaagccctgcagaaaacaactccccagccgcagcagcctcagccccatctccggaaagt
actccagaagccgcaacagccgcagcacctactgaacaacagcaacaaaatcaaagaatg
gatcgcccgcaacgccgcgagttcagacctaataatcgtgataacagagataatagagat
agaaataacggtggtcgcggtggtcacagacacgatcgcaacgattctcgccgtgatttc
agaaatgatcgccacgataaatatcgcgatgaaggtcaaccgcaaggtgatgatggtcac
tcaaaccctcctgtgcaaacacaagaggtggatcttgctgatattcagctgacagacgaa
gaaaaaacatggctatcgtcaaaagatcttaaatctaaaaacatcacgcaactaactgag
cttgcaacaaagctaaaaatcgaaaacgccgcaggtatgcgccgtcaagatatgatcttt
gagatcttaaaacgtgccgcaaagcttggccaagatatctatggatcgggtgttttagaa
atccttccagatggatacggattcttaagatctcctgactataactatcttccaggaccg
gatgatatttatgtaagcccatcgcaaattcgccgttttggcttaagaacgggcgacact
gttacgggaacggtacgtcctccaaaagagggcgagagatattttgcacttttaaaagtt
gattcgctgaatttcgaaacaactgaaaaaggaaaagataaaattcttttcgacaactta
actcctctatatccaaatgagagacttaagcttgagcatactcctagtgactacacgact
cgcgttgttgatttgatggcgccacttggaaaaggtcaaagagcgttgatcgttgctccg
ccaagaacaggtaaaactgttttaatgcagcaaattgctaacgccattacgacaaatcat
cctgaggtaaagctgattgttctattgatcgatgaacgccctgaggaagtcaccgacatg
caaagaactgtgaaaggcgaagttgtttcatcaacgtttgatgagccacctacacgtcac
gttcaggttgcagagatggttatcgaaaaagcaaaacgtcttgtggagcataagcatgac
gtggtgatccttctggattcaatcactcgtttggcgcgcgcttacaatacggttgttcct
ccatcaggtaagatcttatcggggggtgtggattctaatgctcttcacaaaccgaagcgt
ttctttggtgctgccagaaacattgaagagggtggttctttaacaatcatcgcaacggct
cttatcgataccggatcgcgtatggatgaagttatctttgaggaatttaaaggtactggt
aatgcggagattcatttggatcgtaagcttatggaaaaacgtatcttcccttgcatggac
atcaataaatcaggcactcgtaaagaggaccttcttgtagaaaaagcagatctaaaccgc
ctgtggattctaagaaaagttctagcgccgatgaacgttgttgatgcgatggagttcttg
ttagataaagttgaaaacacgaagacaaatgcggatttcttgaaagcgatgtctggacct
acataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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